Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03794 ATGGCTTCTCGGAACCAGAACAAACCTCCTCACAGCCACTCCAACAACAGAAAAGTTGATGCTGAAGAATTCGCCACAAACAGGCGTCTAAGTATTGATATTGAAGCTGAAAAGATGGAGAGACAAGGAGTGGTTGGGAGAGCTAGAGCACCATTATCCGCGGTAGCGAACAACGCAGAAGGAACCGATTCTAACACCATTGGGTTCACAAAAGAGGATATTGAGGCATTGCTTATTGAGAAGATGAAAAAGGGGAATCCGTATGATAATAAGAAAAAAATGGACCAAATGGTGGATCTTATTAAGCGGCTTAAGCTTTGTGTTCGATGGTGTGTCGATGAAAATGACAAACTTCATTCTGAAGTAGAGTCTGCTGTTAAAAAGTGCTGCGATACTGAGATGGAAATGAAAAATAAGAATGAGGAGCTGAATGAGACTATATCTGATTTGAGGAAGACAATTTCTTCCTTAGAAGAGATAAATGTAAAAGAAAAGATGGAAAAGTTGGTAGCAATTGATGATAATATGAAACTACAGCAATGTAATAGTAGTCTTCAATCAGATCTCAAATCAGCTAATGAGGCTTATAGACGACTTGAAATGGAGAAATCTATCATAGTTGAGAGCCTTAATGATACAAGAGATCTTAATAAGGAGTTGCAGGATCGATTGAAATCTCTTAAAGATTCACAGTGTGAAGCTATAAAGCATAAAGAAATGCTAGCAAGTGAACTTACATGCCTCCGTGAAGAACTAAAAAAAATTACAGAAGATCGTGATCGCATACAAGGACAACTAAATGCTGTCATTTTAGAACGGGAAAAATACATAAAATTTAAATACGAAACATATTCAAAATTGGATAAATTGGCAATTAAAACAGAAGCACTTGAGGAGACTTGTGCATCTCAAAAGGAGAAAATAACGTTACTGGAGCAAAAGTTACGTGCTGAACGGGAGAAGTTAGAGACGGCTGATTTATCTGCTTTGGAAACAAGAGCAATGTTTGAAGAGCAGAAAAGAATCATACGAGAGCTACGAGATCAGTTAGCAGATAAAGAATTTCAAATAGTTGAAGGAGAAAAGCTAAGGAAAAAACTGCACAACACTGTCTTGGAGCTGAAAGGAAATATTCGCGTGTTTTGTCGTGTGCGACCTTTACTACGAGAGGATCGTTCCGAAATGGACATGGTTGTTTCTTACCCAACATCAATGGAAATGCTTGGCCGGGGCATTGAGTTGGTGCAAAATGGACAGAAACACCTGTTTACATTTGACAAGGTGTTTAATCATGGCGCCTCTCAACAGGAAGTTTTCACTGAAATATCACAACTGGTGCAAAGTGCGCTTGATGGCTACAAGGTATGCATTTTTGCTTATGGACAAACGGGTTCAGGAAAAACCTATACAATGATGGGTAGGCCTGACGCTCCAGATCTGAAAGGGATGATACCACTTTCTTTAGAACAGATATTCCAGACTAGTCAATCTCTTAAAGACCAGGGATGGAATTTCAACATGCAGGCATCGGTATTGGAAATATATAACGAGACTATCAAGGATTTGTTATTATCAAATCGGTCAAGTGGGTTTGACCAAACACGAGCAGAAAATAGTGTTCACGGAAAACAGTACACTATTAGACATGACAAAAATGGAAACACGCATGTTTTGGACCTCACCATTGTCGATGTTTGTAGTGTCGATGAGATTTCCTCCCTCCTGCAAAAGGCTGCCCAAATCAGGTCAATGGGAAGAACACAAATGAATGAACAATCGTCAAGAAGCCACTTTGTCGTTACTTTGCGCATATGTGGAATAAATGAGAACACTGAACAACAAGTACAAGGTGTCTTAAACCTTATTGATTTGGCTGGAAGTGAAAGGCTTTCAAGGAGTGGGGCCACTGGAGACCGTTTGAAGGAAACTCAGGCTATCAACCAAAGTCTCTCCTCTTTAAGTAATGTCATATTTGCTTTGGCAAAAAAAGAAGAGCATGTTCCTTTTAGGGATTCAAAACTGACGCACCTACTCCAGCCATGTCTTGAAGGGGATTCCAAAACTTTGATGTTTGTCAACATATCACCTGATCAATCTTCAATTGATGAGTCACTTTGCTCACTCCGCTTTGCAGCTAGAGTTAATGCTGTGAAATTGGGGTTTCACGGTGTGAAACCTAGACATCTACATGGTGCTTAG 2199 0.3965 MASRNQNKPPHSHSNNRKVDAEEFATNRRLSIDIEAEKMERQGVVGRARAPLSAVANNAEGTDSNTIGFTKEDIEALLIEKMKKGNPYDNKKKMDQMVDLIKRLKLCVRWCVDENDKLHSEVESAVKKCCDTEMEMKNKNEELNETISDLRKTISSLEEINVKEKMEKLVAIDDNMKLQQCNSSLQSDLKSANEAYRRLEMEKSIIVESLNDTRDLNKELQDRLKSLKDSQCEAIKHKEMLASELTCLREELKKITEDRDRIQGQLNAVILEREKYIKFKYETYSKLDKLAIKTEALEETCASQKEKITLLEQKLRAEREKLETADLSALETRAMFEEQKRIIRELRDQLADKEFQIVEGEKLRKKLHNTVLELKGNIRVFCRVRPLLREDRSEMDMVVSYPTSMEMLGRGIELVQNGQKHLFTFDKVFNHGASQQEVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGMIPLSLEQIFQTSQSLKDQGWNFNMQASVLEIYNETIKDLLLSNRSSGFDQTRAENSVHGKQYTIRHDKNGNTHVLDLTIVDVCSVDEISSLLQKAAQIRSMGRTQMNEQSSRSHFVVTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINQSLSSLSNVIFALAKKEEHVPFRDSKLTHLLQPCLEGDSKTLMFVNISPDQSSIDESLCSLRFAARVNAVKLGFHGVKPRHLHGA 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03794 732 Coils Coil 182 202 - -
Trre7g03794 732 FunFam Kinesin-like protein 323 719 - -
Trre7g03794 732 Coils Coil 210 230 - -
Trre7g03794 732 PANTHER KINESIN-LIKE PROTEIN KLP-3 80 720 IPR027640 GO:0003777|GO:0007018
Trre7g03794 732 CDD KISc_C_terminal 375 719 - -
Trre7g03794 732 Coils Coil 238 265 - -
Trre7g03794 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 337 716 IPR027417 -
Trre7g03794 732 MobiDBLite consensus disorder prediction 1 24 - -
Trre7g03794 732 ProSitePatterns Kinesin motor domain signature. 617 628 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre7g03794 732 ProSiteProfiles Kinesin motor domain profile. 377 717 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03794 732 Coils Coil 336 356 - -
Trre7g03794 732 Pfam Kinesin motor domain 383 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03794 732 SMART kinesin_4 375 725 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03794 732 PRINTS Kinesin heavy chain signature 452 473 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03794 732 PRINTS Kinesin heavy chain signature 587 604 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03794 732 PRINTS Kinesin heavy chain signature 667 688 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03794 732 PRINTS Kinesin heavy chain signature 618 636 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03794 732 Gene3D Kinesin motor domain 321 719 IPR036961 -
Trre7g03794 732 Coils Coil 287 328 - -
Trre7g03794 732 Coils Coil 133 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03794 Trre-Chr7 46056463 46062049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03794 282 717 Calmodulin-binding Proteins AT5G65930 35.491 1.37e-77 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03794 K10405 - gmx:100818473 907.901