Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03783 ATGAGCAGTGCTCTCTTGATTTTGGCAATAGGAATATGCACAGGCTTTGTGTTTGGAGCCGGTTTAGCATTTTCAATTTTATTCTGCTTCACGTTTCGAAAGAATCATGTAGAGGTAGATGTGGAGAAGAGCGGTCCTATGAGAAAAGCGGTCGTTACTCTTCAAGTCAAAGAGGCTGATTCCGGCTTATCAGACTCCAATGTGGCTTTCGAGTCACCAAGAACATCGGAATGGAGTAACACAGCTTTATGGTTAGAAGGACTTAGGAAGAAGAATGCAGCATGTGGAATTCCTAAGTATTCTTACAAAGAAATAGAAAAGGCTACTTCAAATTTCACAACAATCATAGGCAATGGAGCATTTGGTTCTGTTTACAAAGCAGTCATGTCTACAGGCGAGACGGTTGCAGTTAAAGTTCTTGGTGCTAATTCAAGACAAGGAGAACAAGAATTTTTAACTGAGGTCTTATTACTTGGAAGGTTACACCACAAAAATCTTGTGGGTTTGGTGGGATATGCTGCGGAAAGAGGACAGCATATGCTCCTTTACAATTACATGAGCAATGGCTGTCTTGCTTCTCATTTGTATGGCAATAATCATGAGCCGTTGAGCTGGGATTTGAGACTTAACATAGCGCTAGATGTTGCAATGGTGCTGGAATATCTACATTATGGGGCGGATCCACCTGTTGTGCACCGTGACATCAAGTCCTCTAACATTCTATTGGACCAATTTATGAAAGCCAAGATCACCGACTTTGGCCTTTCGAGACCAGAGATGACTAAACCTCGTTTGTCAAACGTTAGAGGAACTTTTGGATATCTTGATCCCGAGAATCCACAGCAGGGCCTCATGGATTATGTAAAACTAGCTACCATGGAAAGCGACGGCAAGATTGGATGGGAAGAAATTGTGGATCCGGTACTGAAAGGAAACTATGATGTACATAAGCTTAATGATATGGCTTCACTTGCATTCAAATGTGTCAATGAGATCTCCAAAATTCGACCATCAATGAGGGAAATCGTTCAAGCATTATCGCAACTTTATAAGAAGCCTAATATAAATTCTAACCGAGCATCTTCTTCTACATTAAGCAAAACTCCTTCTGCGTTATATGAAGTGTCCCTTGAAGTGAAACAGTCAGAGGATCTGCGCAGATTGCACAGCCGATAA 1176 0.415 MSSALLILAIGICTGFVFGAGLAFSILFCFTFRKNHVEVDVEKSGPMRKAVVTLQVKEADSGLSDSNVAFESPRTSEWSNTALWLEGLRKKNAACGIPKYSYKEIEKATSNFTTIIGNGAFGSVYKAVMSTGETVAVKVLGANSRQGEQEFLTEVLLLGRLHHKNLVGLVGYAAERGQHMLLYNYMSNGCLASHLYGNNHEPLSWDLRLNIALDVAMVLEYLHYGADPPVVHRDIKSSNILLDQFMKAKITDFGLSRPEMTKPRLSNVRGTFGYLDPENPQQGLMDYVKLATMESDGKIGWEEIVDPVLKGNYDVHKLNDMASLAFKCVNEISKIRPSMREIVQALSQLYKKPNINSNRASSSTLSKTPSALYEVSLEVKQSEDLRRLHSR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03783 391 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Trre7g03783 391 Gene3D Transferase(Phosphotransferase) domain 1 186 354 - -
Trre7g03783 391 FunFam serine/threonine-protein kinase PBS1-like 84 185 - -
Trre7g03783 391 Pfam Protein kinase domain 114 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03783 391 PANTHER OS01G0750732 PROTEIN 23 362 - -
Trre7g03783 391 SUPERFAMILY Protein kinase-like (PK-like) 96 346 IPR011009 -
Trre7g03783 391 Gene3D Phosphorylase Kinase; domain 1 78 185 - -
Trre7g03783 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Trre7g03783 391 ProSiteProfiles Protein kinase domain profile. 110 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03783 391 SMART serkin_6 110 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03783 Trre-Chr7 45939861 45942383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03783 96 346 Receptor kinase-like Gene Family AT3G19300 38.869 6.59e-60 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Trre7g03783 Pkinase 4.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03783 - - lang:109332283 496.508