Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03771 ATGGAACAAGAAAATGCTTATAGATTAAATGTGTCTCTAGATGAGTTGGGTTTCAATGCTGAAAATGATAGCAATAGTGGAAAAAAGAGAAAGAAATACTATAATGAAGATGGCACAAGAGTGTTCAAATCAAAAAATCTTTTGGTTGAAAGGAGGAGGAGGGAGAAACACCATTCCAGGCTTTGCATTCTTCGATCTTTAATACCAATCATCACAAAATTAACCAAAGATAGCGTTATTGAAGATGCTATTACTTATACCAAGAAGCTTCAATATGAAGTTGACTATCTTACACAAGAGCTTTGTGCAATGGAAGAAAAAGAAAAGTTAGAGGAAATAGCAGAGCCAAAAATAATAGATGAATTTTCTGCTGCTGAAGAGATGAAGAATTGGGGGATACAGGAAGAAGTTCAAGTGGAAAAAATTAGTGAAAATAAGCTCTGGATTAAGATAATCATTGAGAAAAATACAGGGAGGTTCATGAGATTAATGGAGACTATGAATGGTTTAGGCATTGAAATGATAGAAGCCAATGTTACAACCATAAAAGGAGCATATTTGATTATAACTTCTATTAAGGGTATTGGTTTTGATATTGATCAAGCAAAACATTTGTTGGCAGATATAATCAAAAGTATTTAG 642 0.3287 MEQENAYRLNVSLDELGFNAENDSNSGKKRKKYYNEDGTRVFKSKNLLVERRRREKHHSRLCILRSLIPIITKLTKDSVIEDAITYTKKLQYEVDYLTQELCAMEEKEKLEEIAEPKIIDEFSAAEEMKNWGIQEEVQVEKISENKLWIKIIIEKNTGRFMRLMETMNGLGIEMIEANVTTIKGAYLIITSIKGIGFDIDQAKHLLADIIKSI 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03771 213 Pfam Helix-loop-helix DNA-binding domain 46 91 IPR011598 GO:0046983
Trre7g03771 213 Gene3D - 35 117 IPR036638 GO:0046983
Trre7g03771 213 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 22 192 - -
Trre7g03771 213 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 41 90 IPR011598 GO:0046983
Trre7g03771 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 42 105 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03771 Trre-Chr7 45798284 45800063 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03771 42 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 46.893 1.67e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Trre7g03771 HLH 1.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03771 - - tpra:123918158 213.001