Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03758 ATGAAAGTATTGTTTCTTCTGTTCTTGATCCTTTACTACCCTTGTTGCTACTCACTTACTGACACAATAACACTAAACCAAACTATCAAAGATGGTGATGTTTTAATCTCCAACGTTGGAGGAACGTTTGTACTTGGTTTCTTCAGCTTACAGAATAATTCCAAAACCAGGTACCTTGGTATATGGTATAACAAAATTTCAGAACAAACCATTGTTTGGGTTGCAAACAGAGATACTCCTCTGCATAATACTTCTGGTGTTCTCTCCATCAATAACGGAAACCTCGTACTTCACAAAAACAACGACAAAAACCTTAAACCCATTTGGTCTTCTTCTTCCTCTTCCAATTTTTCTATTTCTACCTCAATTGGAAATGTTTCAGCTATGCTTTTGGACAATGGAAACTTTGTTTTGACTCATAACAATGGAAAGAATGTTGTTTGGCAGAGTTTTGATTTTCCAACTAATACTTTACTTCCTTTCATGAAACTCGGGTTGAACCGGAAAACCGGTTTGAACCGGTTCCTCACATCTTGGAAATCGCCAAATGACCCGGGAACCGGAAACTTGACATACCGGATTGACCCGAACGGGTTTCCCCAATTGTTTCTCTATGGAAATAATAAAGTTCCGGTTTGGAGAACCGGGTCGTGGACGGGTCAACGATGGAGCGGAGTACCTGAAATGACTCCGACTTTCATCTTCAACGTTAGTTTTATTAACGATGAAGATGAAGTTTTTATAATGTATGGTGTGAAGGATCCAAGGGTGTTATCGAGAATGGTGTTGGATGACACGAGTCACGTGAGGAGACTGACGTGGCAACCCAACGAACATAGATGGTTTCAAATATGGTTTGGCCCAAAAGAAGAATGTGATAATTTCGAACAATGCGGGTCGAATTCAAATTGCGACCCATATAATGCTGAAAAGTTTGAGTGTGAGTGTTTACCTGGATTCGAACCGAAATTTCCGAGAGAGTGGTATTTGAGAGATGGGTCTGGTGGGTGTGTTAGGAAGAGGAATGTGTCCACATGTCGAAGTGGGGAAGGGTTTGTGAAAGTTGCACGTGTGAAGGTGCCCGATACTTCTAAGACACGTGTGAATGAGAGTTTAAGTTTGAGGGAGTGTAAGGAAGAATGTTTGGGGGATTGTTCTTGTGTTGCATTTACAAGTGAAAATGAGATGTTGCAAAGTGGGTGTGTTACTTGGCATGGTGGTATGAATGACACAAGAACTTATACACAAGTTGGACAAGATTTGTATGTACGTGTTGATAAGCATGAATTGGCTAGTTATGCAAAACATCCGTATGGTTCTCTTGGCAAAAAGGGATTGGTCGCACTTTTAGTCGTTTGTACTTGCTTGATATTGTTTATGGGGACCATTTTCATGTATTGGTTTGTAAAAGCGAGAAAACATGGGGCGAGAAGGGATCACAAGTTTTCCTTTCGTCTTAGCTTTCCTGACTCGGATCAGCAAGAATTTGAAAGTACAAACAATTCAAATTTACCATTCTTTGATCTTAGCTCCATAGCTGCTGCAACAGACCATTTTTCAATTGCTAACAAGCTTGGTGAAGGTGGTTTTGGTTCTGTTTATAAGGGTATATTGAGCAACGGAACGGAAATTGCAGTAAAGAGGCTGTCAAAATATTCTGGCCAAGGCGTAGAAGAGTTTAAAAATGAGGTTGTTTTGATTTCAAAACTCCAACACAGAAATCTTGTTAGGATCATAGGTTGTTGCGTTCAAGGAGACGAGAAGATGTTAATCTATGAGTATTTACCTAACAAAAGCTTAGACTTTTTCATTTTTGATAAATCTAAAAGTTCAGAGCTAGACTGGAGAAAGCGGTTTGATATTATCTGCGGCGTTGCTAGAGGGATCTTATATCTTCACCATGACTCGCGATTACGAATCATTCATAGAGACCTAAAGGCCAGCAATGTTTTATTGGATACTGCATTGAACCCAAAAATTGCAGATTTTGGTATGGCTAGAATGTTTGGTGGAGATCAAATTGAAGCAACAACAAAACGTGTCGTTGGAACCTATGGTTATATGTCTCCAGAGTACGCAATGGAAGGACAATTTTCGGTGAAATCTGATGTATACAGCTTTGGAGTTTTGCTGCTAGAGATAGTTACAGGCAAAAAGAACAGTGGTCAATATGAAGACAATGAATCCACAAATTTAGTTGGACATATATGGAATCTATGGAGAGAAGACAAAGCCATGGATATTATTGATGAATCATTAGGAGAGTCATTCTCTGAGCTCGAAGTCCAAAGATGCATACAAATTGGACTTTTATGTGTACAAGATTTTGCTGTTGACAGACCATCTATGTCAGCTGTTGTTTCTATGTTGGGAAATGATTCAACTCTTCCTACTCCAAAACAACCAGCATTTATTTTCAAGAAAAGTAATTATGAGAGTTCAAACCCCTCAACCAGTGAAGGAATATACTCAGTAAATGATGTAAGTATGACTATGATTGAAGCTCGCTAA 2511 0.3919 MKVLFLLFLILYYPCCYSLTDTITLNQTIKDGDVLISNVGGTFVLGFFSLQNNSKTRYLGIWYNKISEQTIVWVANRDTPLHNTSGVLSINNGNLVLHKNNDKNLKPIWSSSSSSNFSISTSIGNVSAMLLDNGNFVLTHNNGKNVVWQSFDFPTNTLLPFMKLGLNRKTGLNRFLTSWKSPNDPGTGNLTYRIDPNGFPQLFLYGNNKVPVWRTGSWTGQRWSGVPEMTPTFIFNVSFINDEDEVFIMYGVKDPRVLSRMVLDDTSHVRRLTWQPNEHRWFQIWFGPKEECDNFEQCGSNSNCDPYNAEKFECECLPGFEPKFPREWYLRDGSGGCVRKRNVSTCRSGEGFVKVARVKVPDTSKTRVNESLSLRECKEECLGDCSCVAFTSENEMLQSGCVTWHGGMNDTRTYTQVGQDLYVRVDKHELASYAKHPYGSLGKKGLVALLVVCTCLILFMGTIFMYWFVKARKHGARRDHKFSFRLSFPDSDQQEFESTNNSNLPFFDLSSIAAATDHFSIANKLGEGGFGSVYKGILSNGTEIAVKRLSKYSGQGVEEFKNEVVLISKLQHRNLVRIIGCCVQGDEKMLIYEYLPNKSLDFFIFDKSKSSELDWRKRFDIICGVARGILYLHHDSRLRIIHRDLKASNVLLDTALNPKIADFGMARMFGGDQIEATTKRVVGTYGYMSPEYAMEGQFSVKSDVYSFGVLLLEIVTGKKNSGQYEDNESTNLVGHIWNLWREDKAMDIIDESLGESFSELEVQRCIQIGLLCVQDFAVDRPSMSAVVSMLGNDSTLPTPKQPAFIFKKSNYESSNPSTSEGIYSVNDVSMTMIEAR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03758 836 ProSiteProfiles PAN/Apple domain profile. 346 426 IPR003609 -
Trre7g03758 836 CDD STKc_IRAK 525 790 - -
Trre7g03758 836 Gene3D - 15 151 IPR036426 -
Trre7g03758 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Trre7g03758 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 485 594 - -
Trre7g03758 836 Pfam S-locus glycoprotein domain 213 324 IPR000858 GO:0048544
Trre7g03758 836 ProSiteProfiles EGF-like domain profile. 288 326 IPR000742 -
Trre7g03758 836 PIRSF SRK 1 836 IPR024171 GO:0004674
Trre7g03758 836 SUPERFAMILY Protein kinase-like (PK-like) 503 809 IPR011009 -
Trre7g03758 836 SMART ntp_6 347 425 IPR003609 -
Trre7g03758 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 798 - -
Trre7g03758 836 Gene3D Phosphorylase Kinase; domain 1 484 594 - -
Trre7g03758 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 15 151 - -
Trre7g03758 836 SMART blect_4 26 154 IPR001480 -
Trre7g03758 836 CDD PAN_AP_plant 344 425 - -
Trre7g03758 836 CDD B_lectin 26 154 IPR001480 -
Trre7g03758 836 Pfam Protein tyrosine and serine/threonine kinase 521 753 IPR001245 GO:0004672|GO:0006468
Trre7g03758 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 185 IPR036426 -
Trre7g03758 836 ProSiteProfiles Protein kinase domain profile. 519 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03758 836 Pfam Domain of unknown function (DUF3403) 792 836 IPR021820 GO:0004674
Trre7g03758 836 Pfam D-mannose binding lectin 70 180 IPR001480 -
Trre7g03758 836 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Trre7g03758 836 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 782 - -
Trre7g03758 836 SMART serkin_6 519 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03758 836 ProSiteProfiles Bulb-type lectin domain profile. 20 151 IPR001480 -
Trre7g03758 836 Gene3D Transferase(Phosphotransferase) domain 1 595 800 - -
Trre7g03758 836 Pfam PAN-like domain 346 410 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03758 Trre-Chr7 45709810 45713670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03758 487 836 Receptor kinase-like Gene Family AT4G11530 55.462 2.91e-132 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g03758 PK_Tyr_Ser-Thr 7.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03758 - - gmx:100812814 1315.44