Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03756 ATGGATTCTACTAAAAATCTTATCTACCTCATCACAGCCAAAAAAGATAAACACAAATGGCTGCTAATTAATTCTTTGATTATACTTCTCACCTTCTCATTTTGCTCTTGTTCTTCTGATACCATAACTTCTGACAAACCTATAAGAGATGGTGAGCTTCTAATATCTAAATCTAAAACGTTCGCTCTTGGATTCTTCACTCCAGGAAAGTCCACCTCTCGCTATGTTGGAATTTGGTACAACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAACCGAGATAGTCCAATCAATGACACTTCTGGAATCCTATCGATCGACCAAGATGGAAATCTAGTACTCAACCACAACCTTAGCACCATTCCCATTTGGTCTACCAATGTTTCAATCCCACAATCACAAAGAAATAGTACCAGTGTTATAGCTCAACTATCAGATATAGGAAACCTTGTTCTGATGCTAAACAACACCAAAACTGTCATATGGGAAAGCTTTGATCATCCCACGGACACTTTGCTACCATATCAAAGGCTTGGTTTTGATAGAAAAACTAATCAAAGTTGGTTCCTTCAATCCTGGAAGACAGATGATGACCCTGGAAAGGGCGCATTCACGTTGAAATTCAGCACCATTGGTAAAACTCAATTCTTTATGTACAAACATAACCTTCCTTGGTGGCGTGGTGGACCTTGGATTGGAACAATATTAGCAGGTGTACCTAATGTTAAACGAAATAGGGCTACTTTTAACGTTTCTTTTATTGAAGATGAGAACAATGTAGCACTCGCATATAACATGTTAGATAAGTCTGTCATTACTAGGTTAGTGGTTCAGCAATCTGGTTTCTTTCAAACACTCACGTGGGACAATCAAAAGACTCAATGGAACCGGTTCTATTCAGAACCTGCAAACCAATGTGATGACTATGGAACATGTGGATCAAACAGTAATTGTGACCCTTTCAACTTTGACGACTTCAAGTGTACTTGTTTACCTGGTTTTGAACCCAAATTTCCACGTGATTGGTACAATAATGGAGATGGGTCAGGAGGGTGTGTAAGGAAGAAAGGTGAATCTGTTTGCGGGAACGGAGAAGGGTTTGTCAAAGTTGTTAGCTTGAAAGTTCCTGATACATCTGTTGCGGTTGCTAAAGGTGGTTTGAGTTTAGAAGAATGTGAGAAAGAATGTTTGAGAAACTGCTCTTGTACTGCCTATGTAGTTGCTAATGTGAGTAATGGTGGAAGTGGCTGTTTGGCATGGCATGGGGATTTAATGGACATTCAAAAAATAACTGATCAAGGACAAGATTTATATTTACGTGTCGATAAAGTTGAACTAGCCAATTACTATAGTAAAAGCAAAGGAGTCCCTACCAAAAAGAGGTTGGCTGCAATTCTGGTAGCTTCTATCGTTGCAATTGTCATCTTCGTCTTCTGTGTGTATTGCAGGTGGAAGAAAAAAAGAAAGGATAAAATGATGAGACAATTACACCAAGATTCCTCTGGAGAAGAGGATGGTGCTCAAAGCGACACACATCCAAATCTACCCTTTTTCAGCCTTAAAACGATAATGACAGCTACAAGAAACTGTGGTCATGAGCATAAGCTTGGACAAGGTGGAGTTGGCTCTGTCTATAAGGGATGCTTGGTTAATGGAAAAGAGATAGCAGTGAAAAGATTATCCAAACATTCAGGTAAAGGCAAAGATGAGTTTAAAACAGAAGTTAGACTTTTAGTTAAACTCCAACACAGAAATCTAGTGCGATTGCTTGGTTGTTGCTTTGAAAAAGAAGAAAGGATGCTAGTTTATGAATATCTACCAAACAAAAGCCTAGACTTCTTTATATTTGATCAAAACCAAAGGTCATCATTGGATTGGGGTAAGCGTTTTGAAATTATTTGTGGGATTGCTCGAGGTGTATTATATCTTCATCAAGATTCAAGGTTGAAAATAATTCATAGAGATCTAAAGGCTAGCAATGTTCTCCTTGATGCTGCAATGAATCCCAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATGAAATCCAAGCAAGAACAAAAAGAGTGGTTGGGACATATGGATATATGGCACCAGAATATGCAATGGAAGGACGATATTCAACGAAAACTGATGTCTTCAGTTATGGGGTCTTACTACTGGAGATTATTGCTGGCATAAGAAATACACATTGTGAAATAGGAAGAGCCTCCCCAAATTTAATTGGGCATGTGTGGACACTATGGACAGAAGGAAGGGCCTTGGAAACTGTTGATTTAACACTAAATCAGTCATATCCTCCTACTATAGTTCTAAGATGCATTCAAATTGGACTCTTGTGTGTGCAAGAAAATGCGATGAATAGACCAACAATGTCAGAAGTTGTTTTCATGCTATGCAATGAAACAACTCTTTGCCAACCTCAAAAACCAGCATTCTTATTCATTGGAAACCAAGTTTTGCAAGACTCGTCAACATCAGGAGGAGGATCATCAATAAATGAAATATAA 2520 0.3837 MDSTKNLIYLITAKKDKHKWLLINSLIILLTFSFCSCSSDTITSDKPIRDGELLISKSKTFALGFFTPGKSTSRYVGIWYNNLPIQTVVWVANRDSPINDTSGILSIDQDGNLVLNHNLSTIPIWSTNVSIPQSQRNSTSVIAQLSDIGNLVLMLNNTKTVIWESFDHPTDTLLPYQRLGFDRKTNQSWFLQSWKTDDDPGKGAFTLKFSTIGKTQFFMYKHNLPWWRGGPWIGTILAGVPNVKRNRATFNVSFIEDENNVALAYNMLDKSVITRLVVQQSGFFQTLTWDNQKTQWNRFYSEPANQCDDYGTCGSNSNCDPFNFDDFKCTCLPGFEPKFPRDWYNNGDGSGGCVRKKGESVCGNGEGFVKVVSLKVPDTSVAVAKGGLSLEECEKECLRNCSCTAYVVANVSNGGSGCLAWHGDLMDIQKITDQGQDLYLRVDKVELANYYSKSKGVPTKKRLAAILVASIVAIVIFVFCVYCRWKKKRKDKMMRQLHQDSSGEEDGAQSDTHPNLPFFSLKTIMTATRNCGHEHKLGQGGVGSVYKGCLVNGKEIAVKRLSKHSGKGKDEFKTEVRLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDQNQRSSLDWGKRFEIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDEIQARTKRVVGTYGYMAPEYAMEGRYSTKTDVFSYGVLLLEIIAGIRNTHCEIGRASPNLIGHVWTLWTEGRALETVDLTLNQSYPPTIVLRCIQIGLLCVQENAMNRPTMSEVVFMLCNETTLCQPQKPAFLFIGNQVLQDSSTSGGGSSINEI 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03756 839 CDD B_lectin 45 169 IPR001480 -
Trre7g03756 839 ProSiteProfiles Bulb-type lectin domain profile. 39 166 IPR001480 -
Trre7g03756 839 PIRSF SRK 14 838 IPR024171 GO:0004674
Trre7g03756 839 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 27 793 - -
Trre7g03756 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 607 810 - -
Trre7g03756 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Trre7g03756 839 ProSiteProfiles EGF-like domain profile. 303 341 IPR000742 -
Trre7g03756 839 Gene3D Transferase(Phosphotransferase) domain 1 607 813 - -
Trre7g03756 839 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 507 606 - -
Trre7g03756 839 Pfam S-locus glycoprotein domain 227 339 IPR000858 GO:0048544
Trre7g03756 839 CDD STKc_IRAK 537 804 - -
Trre7g03756 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 200 IPR036426 -
Trre7g03756 839 Pfam D-mannose binding lectin 87 195 IPR001480 -
Trre7g03756 839 ProSiteProfiles PAN/Apple domain profile. 362 443 IPR003609 -
Trre7g03756 839 ProSiteProfiles Protein kinase domain profile. 531 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03756 839 Gene3D Phosphorylase Kinase; domain 1 506 606 - -
Trre7g03756 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 34 166 - -
Trre7g03756 839 SUPERFAMILY Protein kinase-like (PK-like) 513 810 IPR011009 -
Trre7g03756 839 SMART serkin_6 534 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03756 839 CDD PAN_AP_plant 363 442 - -
Trre7g03756 839 Gene3D Hepatocyte Growth Factor 360 440 - -
Trre7g03756 839 SMART ntp_6 363 442 IPR003609 -
Trre7g03756 839 Gene3D - 32 167 IPR036426 -
Trre7g03756 839 Pfam PAN-like domain 362 428 IPR003609 -
Trre7g03756 839 SMART blect_4 45 169 IPR001480 -
Trre7g03756 839 Pfam Protein tyrosine and serine/threonine kinase 534 800 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03756 Trre-Chr7 45700180 45704398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03756 519 826 Receptor kinase-like Gene Family AT4G11530 56.774 8.39e-117 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g03756 PK_Tyr_Ser-Thr 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03756 - - tpra:123918163 1409.43