Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03755 ATGCTTCCATATCAAAGGCTTGGTTTTGATAGAAAAAGTAATCAAAGTTGGTCTCTTCGATCCTGGAAGACCGATGATGACCCTGGAACTGGTGCATTCAAAGTGAAATTCAGCACCAATATTGGCAAACATCAAATGCTTATGTACAACCATGATCTTCCTTGGTGGCGTGCTGGACATTGGAACGGAGAATTATTGGTAGGTCTACCTTATATGAAACGAGATACGGACATTATTAACATTTCTTTTGGTGAAGATGACAACTATGTAGCACTCTCATACAAAATGTATGATAAGTCTCTCATGTCTAGGGTAGTGGTTCAGCAATCTGGTTTCGTTCAAGCATTCACATGGGAAAGTCAAAAGAGCCAATGGGCCCAGTACTGGTCTGAACCAACAAACCAATGCGATAACTATGGAACATGTGGAATAAACAGTAATTGTGACCCTTCGAACTTCGTCGGTTTTAAGTGTACTTGTTTACCTGGTTTTGAACCCAAATTTCCACGTGATTGGTATGGTAGTAGAGATGGGTCAGGAGGGTGTGTAAGGAAGAAAGGTGTATCTGATTGTGGGAATGGAGAAGGGTTTGTCAAAGTTCAAAGCTTGAAAGTTCCTGATACATCTGTGGCTGTTGCTAAAGGTGGTTTGAGTTTGGAAGAATGTGATAAAGAATGCTTGAGAGACTGTTCTTGTACTGCTTATGCAGTTGCTGATGTGAGGAAAGGAGGAAGTGGATGTTTGACATGGCATGGAAATTTAACAGACATTCAAAAACTTACTGATCAAGGCCAAGATTTATTTTTACGTGTCGATAAAGTTGAACTAGCCGATTACTATAAAAAAAGCAAAGGAGTCCATGATAAAAAGATTTTGTCTGCAATTATTGTAGCTTCTATAGTTGCTATTATCATCCTCCTCACCTGTGTGAATTACCTGCGGAAGAAAAAAAGAAAGGATAAAGTGATGCGGCAATTAAACCAAGATTCCTCTGAAGAAGAGAATGGTGCTCAAAGCAACAAACATCCAAATCTACCATTTTTCAGCTTTAAAACGATAATGACAGCTACAAGAAACTGTGATCATGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCATGGTTAATGGACAAGAGATAGCAGTGAAAAGAATATTTGGAGAAGATGAAATCCAAGCAAACACAAAAAGAGTGGTTGGAACATATGGATATATGTCACCGGAATATGCAATGGAAGGACGGTACTCAACAAAATCTGATGTCTTCAGTTATGGTGTCTTACTACTAGAAATTATTGCTGGCAAAAGAAACACCCATTGTGAAATAGGAAGAGCCTCCCCAAATTTAATTGGACATGTGTGGACACTATGGACAGAAGGAACAGCCTTGGATATAGTTGATTCATCCCTAAACCAGTCTTATCCTTCAGCTATAGTCCTGAGATGCATTCAAATTGGACTTTTGTGTGTGCAAGAAAATGCCATGAGTAGACCAACAATGTCAGAAGTTGTTTTCATGTTAGGCAATGAAACACCTATTTGCCAACCTCAAAAACCAGCATTCTTATTGATTGGCAAACAAGATTTGCAAGATTCATCAACATCAGGAGGAGGATCTTCAATAAATGAATTAACAGAAACTACCATCAGTGCTCGCTAA 1674 0.3901 MLPYQRLGFDRKSNQSWSLRSWKTDDDPGTGAFKVKFSTNIGKHQMLMYNHDLPWWRAGHWNGELLVGLPYMKRDTDIINISFGEDDNYVALSYKMYDKSLMSRVVVQQSGFVQAFTWESQKSQWAQYWSEPTNQCDNYGTCGINSNCDPSNFVGFKCTCLPGFEPKFPRDWYGSRDGSGGCVRKKGVSDCGNGEGFVKVQSLKVPDTSVAVAKGGLSLEECDKECLRDCSCTAYAVADVRKGGSGCLTWHGNLTDIQKLTDQGQDLFLRVDKVELADYYKKSKGVHDKKILSAIIVASIVAIIILLTCVNYLRKKKRKDKVMRQLNQDSSEEENGAQSNKHPNLPFFSFKTIMTATRNCDHENKLGQGGFGSVYKGCMVNGQEIAVKRIFGEDEIQANTKRVVGTYGYMSPEYAMEGRYSTKSDVFSYGVLLLEIIAGKRNTHCEIGRASPNLIGHVWTLWTEGTALDIVDSSLNQSYPSAIVLRCIQIGLLCVQENAMSRPTMSEVVFMLGNETPICQPQKPAFLLIGKQDLQDSSTSGGGSSINELTETTISAR 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03755 557 Gene3D Hepatocyte Growth Factor 190 269 - -
Trre7g03755 557 Pfam S-locus glycoprotein domain 56 168 IPR000858 GO:0048544
Trre7g03755 557 ProSiteProfiles PAN/Apple domain profile. 191 272 IPR003609 -
Trre7g03755 557 CDD PAN_AP_plant 189 271 - -
Trre7g03755 557 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Trre7g03755 557 MobiDBLite consensus disorder prediction 324 345 - -
Trre7g03755 557 MobiDBLite consensus disorder prediction 535 557 - -
Trre7g03755 557 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 389 503 - -
Trre7g03755 557 Gene3D Transferase(Phosphotransferase) domain 1 384 520 - -
Trre7g03755 557 Pfam Protein tyrosine and serine/threonine kinase 400 510 IPR001245 GO:0004672|GO:0006468
Trre7g03755 557 ProSiteProfiles EGF-like domain profile. 132 170 IPR000742 -
Trre7g03755 557 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 391 517 - -
Trre7g03755 557 Pfam PAN-like domain 191 257 IPR003609 -
Trre7g03755 557 CDD EGF_CA 134 167 - -
Trre7g03755 557 SMART ntp_6 192 271 IPR003609 -
Trre7g03755 557 MobiDBLite consensus disorder prediction 329 345 - -
Trre7g03755 557 SUPERFAMILY Protein kinase-like (PK-like) 345 523 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03755 Trre-Chr7 45695547 45699061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03755 384 557 Receptor kinase-like Gene Family AT4G23280 42.778 8.64e-42 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g03755 PK_Tyr_Ser-Thr 1.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03755 - - tpra:123918163 641.728