Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03753 ATGGACTCTGCTAGAAATCTTCTCTACCTTGTCACAACGAAAAATCTTAAACACAAGCTAGTATTACATAAAATTTGGTTGCTTATAAACTCTTTGATTCTACTTATCACTTTCTCCTTTTGCTCTTGTTCTTCTGATATCATATCTATTGATAAACCAATAAGAGATGGTGAGATTCTTGTTTCTAAATCTAAAACATTTGCTCTTGGATTCTTCACTCCAGCAAAAGATAGTCCAATCAATGACACTTCTGGAATCCTATCGATCGACCAAGATGGAAATCTAGTACTCCACCACAACCTTAGCACCATTCCCATTTGGTCTACCAATGTTTCATTCCCACAATCACAAAGAAATAATACCAGTGTCATAGCTCAGCTGTCAGATATAGCAAACCTTGTTCTGATGATAAACAATACCAAAACTGTTATCTGGGAAAGCTTTGATCATCCCACAGACACCTTGCTTCCATATCTAAAGGTTGGTTTTGATAGAAAACATAATCAAAGTTGGTTCCTCCAATCATGGAAGACAGATGTTGACCCTGGAAAAGGCGCATTCACGTTGAAATTCAGCACTATTGGCAAACCTCAGTTGTTTATGTACAACCATGATCTTCCTTGGTGGCGTGGTGGACATTGGAACGGTGAATTATTAGTAGGTGTACCTAATATGAAACGAGATATGGCCACTTTTAACGTTTCTTTGGTTGAAGATGACGATCATGTAGCACTCACATATAACATGTTTGAAAAGTCTGTCATTACAAGGATAGTGGTTCAGCAATCTGGTTTCTTTCAAACATTCACGTGGGACAGGCAAAAGACTCAATGGAACCGGTACTGGTCTGAACCAACAGACCAATGTGATAACTATGGAACATGTGGATCAAACAGTAATTGTGACCCTTTGAATTTTGAGGACTTTAAGTGTACTTGTTTACTTGGTTTTGAACCAAAATTTCCACGCGATTGGTATGAGAGTAGAGATGGGTCAGGAGGGTGTGTAAGGAAGAAAGGTGTATCTGTCTGTGATAATGGAGAAGGGTTTGTCAAAATTGTAAGCTTGAAAGTTCCTGATACATCTGTGGCAGTTGCTAAAGGTGGTTTGAGTTTGGAGGAATGCGAGAAAGAATGTTTCAAAAACTGCTCTTGTACTGCCTATGCAGTTGCTGATGTGAGGAATGGTGGAAGTGGTTGTTTGGCTTGGTATGGTGATTTAATGGACATTCAAAAACTTAGTGATCAAGGCCAAGATTTATTTTTACGCGTCAATGCTGTTGAACTAGCCAAAGCCAACAGAAGCAGCAAAGGAATCTTTGGTAGAAAGAGGTTGGCTGCGATTCTCGTAGTTTCTATAGTTACAATTGTCGTCCTCCTCTCATGTGTGTATTGCATGTGGAAGAAAAAAATAAAGGATAAAATGCTGCAAGAATCATACCAAGATTCCTCTGGAGAAGAGATCAGTGCTCAAAGAAACACACATTCAAATCTACCCTTTTTCAGCTTTAAAACAGTATTAACAGCTACAAGAAATTTTAGTCAAGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCTTGGTTAATGGACAAGAGGTAGCAGTGAAAAGATTGTCCAGAGATTCAGGTCAAGGAAAAGAAGAGTTTAAAAACGAGGTTACACTTTTAGTTAAACTTCAACACAGAAATCTAGTGAAGCTGCTTGGTTGTTGTTGTGAAAAAGAAGAACGGATGCTAGTTTATGAATACCTACCAAACAAAAGCCTAGACTTCTTTATATTCAATCAAAACCAGAGGTCATCATTGGATTGGGGTAAGCGTTTTGAAATTATTTGTGGGATTGCTCGAGGTGTATTATATCTTCACCAAGATTCAAGGTTGAAAATAATTCATAGAGATATAAAAGCCAGCAATGTTCTCCTTGATGCTGCAATGAATCCAAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAAATGAAATCCAAGCAAGAACGAAAAGAGTGGTCGGAACATATGGATATATGTCACCGGAATATGCAATGGAAGGACGGTACTCAACAAAATCTGATGTCTTCAGTTATGGTGTCTTACTACTGGAGATTATTGCTGGCCAAAGAAATACACATTGTGAAATAGGAAGAGCATCCCCGAATTTAATTGGACATGTATGGACACTATGGACAGAAGGAAGGGCCTTGGATATAGTTGATCCAGCACTAAACCAATCTTATCCTTCTGCTATAGTTCTGAGATGTATTCAAATTGGACTCTTGTGTGTGCAAGAATACGCCACGAATAGACCAACAATGTCAGAAGTTGTTTTCATGCTATGCAATGAAACACCTCTTTGCCAACCTCAAAAACCAGCATTCTTATTTAATGGCAATCATGATTTGCAAGATTCGTCAACATCAGGAGGAGGATCATCAATAAATGAAGTAACGGAAACTACCATCAGTGGCCGCTAA 2490 0.3843 MDSARNLLYLVTTKNLKHKLVLHKIWLLINSLILLITFSFCSCSSDIISIDKPIRDGEILVSKSKTFALGFFTPAKDSPINDTSGILSIDQDGNLVLHHNLSTIPIWSTNVSFPQSQRNNTSVIAQLSDIANLVLMINNTKTVIWESFDHPTDTLLPYLKVGFDRKHNQSWFLQSWKTDVDPGKGAFTLKFSTIGKPQLFMYNHDLPWWRGGHWNGELLVGVPNMKRDMATFNVSLVEDDDHVALTYNMFEKSVITRIVVQQSGFFQTFTWDRQKTQWNRYWSEPTDQCDNYGTCGSNSNCDPLNFEDFKCTCLLGFEPKFPRDWYESRDGSGGCVRKKGVSVCDNGEGFVKIVSLKVPDTSVAVAKGGLSLEECEKECFKNCSCTAYAVADVRNGGSGCLAWYGDLMDIQKLSDQGQDLFLRVNAVELAKANRSSKGIFGRKRLAAILVVSIVTIVVLLSCVYCMWKKKIKDKMLQESYQDSSGEEISAQRNTHSNLPFFSFKTVLTATRNFSQENKLGQGGFGSVYKGCLVNGQEVAVKRLSRDSGQGKEEFKNEVTLLVKLQHRNLVKLLGCCCEKEERMLVYEYLPNKSLDFFIFNQNQRSSLDWGKRFEIICGIARGVLYLHQDSRLKIIHRDIKASNVLLDAAMNPKISDFGMARIFGENEIQARTKRVVGTYGYMSPEYAMEGRYSTKSDVFSYGVLLLEIIAGQRNTHCEIGRASPNLIGHVWTLWTEGRALDIVDPALNQSYPSAIVLRCIQIGLLCVQEYATNRPTMSEVVFMLCNETPLCQPQKPAFLFNGNHDLQDSSTSGGGSSINEVTETTISGR 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03753 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 182 IPR036426 -
Trre7g03753 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Trre7g03753 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 589 792 - -
Trre7g03753 829 Pfam Protein tyrosine and serine/threonine kinase 515 782 IPR001245 GO:0004672|GO:0006468
Trre7g03753 829 Gene3D Transferase(Phosphotransferase) domain 1 589 793 - -
Trre7g03753 829 MobiDBLite consensus disorder prediction 808 829 - -
Trre7g03753 829 Pfam S-locus glycoprotein domain 209 321 IPR000858 GO:0048544
Trre7g03753 829 Gene3D - 39 149 IPR036426 -
Trre7g03753 829 Gene3D Hepatocyte Growth Factor 342 422 - -
Trre7g03753 829 SMART blect_4 51 151 IPR001480 -
Trre7g03753 829 CDD STKc_IRAK 519 786 - -
Trre7g03753 829 CDD PAN_AP_plant 345 424 - -
Trre7g03753 829 SUPERFAMILY Protein kinase-like (PK-like) 495 798 IPR011009 -
Trre7g03753 829 ProSiteProfiles Protein kinase domain profile. 513 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03753 829 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Trre7g03753 829 Gene3D Phosphorylase Kinase; domain 1 473 588 - -
Trre7g03753 829 Pfam D-mannose binding lectin 76 177 IPR001480 -
Trre7g03753 829 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Trre7g03753 829 PIRSF SRK 17 78 IPR024171 GO:0004674
Trre7g03753 829 PIRSF SRK 74 829 IPR024171 GO:0004674
Trre7g03753 829 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 32 775 - -
Trre7g03753 829 SMART ntp_6 345 424 IPR003609 -
Trre7g03753 829 Pfam PAN-like domain 344 410 IPR003609 -
Trre7g03753 829 ProSiteProfiles EGF-like domain profile. 285 323 IPR000742 -
Trre7g03753 829 ProSiteProfiles Bulb-type lectin domain profile. 1 148 IPR001480 -
Trre7g03753 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 477 588 - -
Trre7g03753 829 SMART serkin_6 513 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03753 Trre-Chr7 45684182 45687607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03753 477 828 Receptor kinase-like Gene Family AT4G11530 53.672 4.71e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g03753 PK_Tyr_Ser-Thr 9.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03753 - - tpra:123914661 1485.32