Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03748 ATGAAAGGTTTCAGTGTCCACACACTCTTTCTCTTTTGTCTCTCAACTTCAACCGTTTTCTTCTCAATCTCTGTTTCTTCTTCTTCTTCTTCTGATACCTTAACAACAACCCAAATCCTTAGAATCAACGAAACCCTTTTCTCACCAAAAGGAATTTTCCAACTCAGTTTCTTTTCCTACAACAATTTTTCCTGGTACTTAGGAATACGTTACAACATCGACCATGACAACAACACAGTTGTTTGGGTTGCAAACAGAAACACCCCAATTCTAAATCCCAATTCTTTTCTCAAATTAACCGACACAGGTAACCTTATTATCATCGATCAATCCAATAAAACCATCTGGGCCACTCAAAAAATCAATAAAAATTCAACCTTTAACAAAAACCCAATTCTTCAGATTTTGGATTCTGGGAATTTGGTTGTATCAGAATCACCAAATGAAAACGACCCAACAAAGTTTTTATGGCAAAGTTTCGATTTTCCAACAGATACTTTGTTACCTGGTATGAAACTTGGTTGGAATTTTGACACAAACACAGAAACATACATAAACTCATGGAAAGTAACAGATCAAGATCCTTCAATTGGAGATATATCTTTCAAGATGGATTATCATGGTGTTCCAGAAATTTTTCTTTGGAAGAATAATAGAAGAATTTATAGAAGTGGGCCATGGAATGGTAAAAGATTCAGTGGTGTACCAGAGATGCAACCAGTTACAGATTCAATTCAATTTAGTTTTGTTCAGAATGAACATGAAGTTTATTATACATTTTCAATTGGGAATGAATCATTGTTTTCTAGACTCAGTGTAGATTCATTAGGGTTTCATCCAAAGAATCATCAAGCTTGGAATTTGAGAGATGGATCTGATGGATGTTTGAGGAATAATGTGTTGGATTGTGATAGTGATAGGTTTTTGCATTTGGTGAATGTGAAGTTACCTGAGACAAGTAATGTTTTTGTGAATAAAAGTATGAGTCTTTTGGAATGTAGTGATTTGTGTAAGAAGAATTGTTCTTGTACTGGTTATGCTAATATTGAAATTGTTAATGGTGGAAGTGGTTGTGTTATGTGGCTTGATCAACTTATTGATATTAGAGCTTATCCTGTTGGTGGTCAAGATCTTTTTGTCAGATTAGCAGCTTCTGATGTAGATGATGATGTGATAAGAGAAAGTTCTGATCGCAAGACAGCAAGGGCTATTGGCATTATGGCTGGGGGTGCAGCTATTATACTTTTGGCAGTAGGAATATGTTTCTTGTGGAGGAAGAAAAAATTGCAGTTTCTTTTGAATTTGAAAGGGAAGTCGGAAAGAAGAGGTTCATTGGAAAAAAGTCAGGATTTGCTTATAACTGAAGGAGTGTTTACAAGTAATAGAGAACAATCAAGTGAAAATAACATGGATGAGCTAGAATTGCCATTCTTTGATTTTAATACCATAACTATGGCTACAAACAATTTCTCTGAACAAAATAAACTTGGACAAGGAGGCTTTGGTATTGTTTACAAAGGTAGGTTGATGGAGGGTCAGGAAATTGCAGTAAAGAGATTATCAAAAAATTCCGGCCAAGGTGTTGAAGAATTTAAGAATGAGGTAAAGTTGATTGTCAAGCTTCAACATCGAAACCTTGTTCGGCTACTTGGTTGCAGCTTTCAGATGGATGAAAAGGTGTTAGTTTATGAGTACATGGAAAATAGAAGCCTTGATGCCATTTTGTTTGACAAAGCTAAGAGATTCTCGCTAGACTGGCAAACACGCTTCAACATTATATCCGGAATAGCTAGAGGACTTCTTTATCTTCACCAAGATTCTAGATTTAGGATCATCCATAGAGATCTTAAAGCAAGCAACATTCTACTTGACCGAGAAATGAATCCAAAGATATCAGATTTTGGGATGGCTAGAATATTTGGCACGGATCAGACAGAAGCAAATACAGTTAGAGTCGTTGGAACATATGGCTATATGTCTCCTGAATATGCTATGGACGGAATCTTCTCGGTGAAATCTGATGTTTTTAGTTTCGGTGTTCTCGTGATGGAGATCATAAGTGGAAAAAAGAACCGAGGTTTCTATTCCGCTAACAAAGAATTGAATCTTCTCGGTCATAGTTGGAAGCTTTGGAAAGAAGAAAATGCTTTGAAACTGATTGATTCTTCCATTAATAATTCATATTCACCTTCTGAGGTTCTTAGATGCATACAAGTTGGGCTATTATGCGTACAAGAGCGAGCAGAAGATAGACCAACAATGTCTTCAGTTGTGTTGATGTTGAGTAGCGAAACAGCAACAATAGCAGAGCCGAAAAATCCTGGATTTTGCCTTGGAAGCACTCCTATTGAAACTGATTCTTCCTCGAGTAAAAAAGATGAATCCTGCACAGTGAACCAAGTTACTGTCACAATGATAGATGGCAGATAG 2430 0.3638 MKGFSVHTLFLFCLSTSTVFFSISVSSSSSSDTLTTTQILRINETLFSPKGIFQLSFFSYNNFSWYLGIRYNIDHDNNTVVWVANRNTPILNPNSFLKLTDTGNLIIIDQSNKTIWATQKINKNSTFNKNPILQILDSGNLVVSESPNENDPTKFLWQSFDFPTDTLLPGMKLGWNFDTNTETYINSWKVTDQDPSIGDISFKMDYHGVPEIFLWKNNRRIYRSGPWNGKRFSGVPEMQPVTDSIQFSFVQNEHEVYYTFSIGNESLFSRLSVDSLGFHPKNHQAWNLRDGSDGCLRNNVLDCDSDRFLHLVNVKLPETSNVFVNKSMSLLECSDLCKKNCSCTGYANIEIVNGGSGCVMWLDQLIDIRAYPVGGQDLFVRLAASDVDDDVIRESSDRKTARAIGIMAGGAAIILLAVGICFLWRKKKLQFLLNLKGKSERRGSLEKSQDLLITEGVFTSNREQSSENNMDELELPFFDFNTITMATNNFSEQNKLGQGGFGIVYKGRLMEGQEIAVKRLSKNSGQGVEEFKNEVKLIVKLQHRNLVRLLGCSFQMDEKVLVYEYMENRSLDAILFDKAKRFSLDWQTRFNIISGIARGLLYLHQDSRFRIIHRDLKASNILLDREMNPKISDFGMARIFGTDQTEANTVRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVMEIISGKKNRGFYSANKELNLLGHSWKLWKEENALKLIDSSINNSYSPSEVLRCIQVGLLCVQERAEDRPTMSSVVLMLSSETATIAEPKNPGFCLGSTPIETDSSSSKKDESCTVNQVTVTMIDGR 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03748 809 ProSiteProfiles Protein kinase domain profile. 490 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03748 809 Pfam Protein tyrosine and serine/threonine kinase 493 759 IPR001245 GO:0004672|GO:0006468
Trre7g03748 809 CDD STKc_IRAK 496 761 - -
Trre7g03748 809 PIRSF SRK 275 809 IPR024171 GO:0004674
Trre7g03748 809 PIRSF SRK 4 277 IPR024171 GO:0004674
Trre7g03748 809 SMART blect_4 37 163 IPR001480 -
Trre7g03748 809 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Trre7g03748 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 566 769 - -
Trre7g03748 809 Pfam D-mannose binding lectin 79 189 IPR001480 -
Trre7g03748 809 Pfam PAN-like domain 303 368 IPR003609 -
Trre7g03748 809 Gene3D Phosphorylase Kinase; domain 1 463 565 - -
Trre7g03748 809 Gene3D Transferase(Phosphotransferase) domain 1 566 773 - -
Trre7g03748 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Trre7g03748 809 Pfam Receptor serine/threonine kinase 446 480 IPR022126 GO:0004674
Trre7g03748 809 SMART serkin_6 490 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03748 809 SMART ntp_6 303 382 IPR003609 -
Trre7g03748 809 CDD PAN_AP_plant 301 383 - -
Trre7g03748 809 Pfam Domain of unknown function (DUF3403) 763 809 IPR021820 GO:0004674
Trre7g03748 809 CDD B_lectin 37 163 IPR001480 -
Trre7g03748 809 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 277 752 - -
Trre7g03748 809 ProSiteProfiles Bulb-type lectin domain profile. 31 156 IPR001480 -
Trre7g03748 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 456 565 - -
Trre7g03748 809 ProSiteProfiles PAN/Apple domain profile. 303 383 IPR003609 -
Trre7g03748 809 Gene3D - 25 160 IPR036426 -
Trre7g03748 809 SUPERFAMILY Protein kinase-like (PK-like) 466 761 IPR011009 -
Trre7g03748 809 Pfam S-locus glycoprotein domain 222 280 IPR000858 GO:0048544
Trre7g03748 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 189 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03748 Trre-Chr7 45640366 45647412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03748 478 804 Receptor kinase-like Gene Family AT4G11530 58.434 2.15e-134 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g03748 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03748 - - cam:101504189 1299.65