Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03747 ATGAAAGGTTTCAGTGTCCACACACTCTTTCTCTTTTGTCTCTCAACTTCAACCGTTTTCTTCTCAATCTCTGTTTCTTCTTCTTCTTCTTCTGATACCTTAACAACAACCCAAATCCTTAGAATCAACGAAACCCTTTTCTCACCAAAAGGAATTTTCCAACTCAGTTTCTTTTCCTACAACAATTTTTCCTGGTACTTAGGAATACGTTACAACATCGACCATGACAACAACACAGTTGTTTGGGTTGCAAACAGAAACACCCCAATTCTAAATCCCAATTCTTTTCTCAAATTAACCGACACAGGTAACCTTATTATCATCGATCAATCCAATAAAACCATCTGGGCCACTCAAAAAATCAATAAAAATTCAACCTTTAACAAAAACCCAATTCTTCAGATTTTGGATTCTGGGAATTTGGTTGTATCAGAATCACCAAATGAAAACGACCCAACAAAGTTTTTATGGCAAAGTTTCGATTTTCCAACAGATACTTTGTTACCTGGTATGAAACTTGGTTGGAATTTTGACACAAACACAGAAACATACATAAACTCATGGAAAGTAACAGATCAAGATCCTTCAATTGGAGATATATCTTTCAAGATGGATTATCATGGTGTTCCAGAAATTTTTCTTTGGAAGAATAATAGAAGAATTTATAGAAGTGGGCCATGGAATGGTAAAAGATTCAGTGGTGTACCAGAGATGCAACCAGTTACAGATTCAATTCAATTTAGTTTTGTTCAGAATGAACATGAAGTTTATTATACATTTTCAATTGGGAATGAATCATTGTTTTCTAGACTCAGTGTAGATTCATTAGGTGAACTTCAAAGACTTACATGGATACATAGTAGAAAATTTTGGACTAAATTTTGGTATGCACCAAAAGATCAATGTGATAATTATAAAGAGTGTGGTCCATTTGGTATATGTGACACAAATGCTTCACCTGTTTGTAATTGTATTAAAGGGTTTCATCCAAAGAATCATCAAGCTTGGAATTTGAGAGATGGATCTGATGGATGTTTGAGGAATAATGTGTTGGATTGTGATAGTGATAGGTTTTTGCATTTGGTGAATGTGAAGTTACCTGAGACAAGTAATGTTTTTGTGAATAAAAGTATGAGTCTTTTGGAATGTAGTGATTTGTGTAAGAAGAATTGTTCTTGTACTGGTTATGCTAATATTGAAATTGTTAATGGTGGAAGTGGTTGTGTTATGTGGCTTGATCAACTTATTGATATTAGAGCTTATCCTGTTGGTGGTCAAGATCTTTTTGTCAGATTAGCAGCTTCTGATGTAGATGATGATGTGATAAGAGAAAGTTCTGATCGCAAGACAGCAAGGGCTATTGGCATTATGGCTGGGGGTGCAGCTATTATACTTTTGGCAGTAGGAATATGTTTCTTGTGGAGGAAGAAAAAATTGCAGTTTCTTTTGAATTTGAAAGGGAAGTCGGAAAGAAGAGGTTCATTGGAAAAAAGTCAGGATTTGCTTATAACTGAAGGAGTGTTTACAAGTAATAGAGAACAATCAAGTGAAAATAACATGGATGAGCTAGAATTGCCATTCTTTGATTTTAATACCATAACTATGGCTACAAACAATTTCTCTGAACAAAATAAACTTGGACAAGGAGGCTTTGGTATTGTTTACAAAGGTAGGTTGATGGAGGGTCAGGAAATTGCAGTAAAGAGATTATCAAAAAATTCCGGCCAAGGTGTTGAAGAATTTAAGAATGAGGTAAAGTTGATTGTCAAGCTTCAACATCGAAACCTTGTTCGGCTACTTGGTTGCAGCTTTCAGATGGATGAAAAGGTGTTAGTTTATGAGTACATGGAAAATAGAAGCCTTGATGCCATTTTGTTTGACAAAGCTAAGAGATTCTCGCTAGACTGGCAAACACGCTTCAACATTATATCCGGAATAGCTAGAGGACTTCTTTATCTTCACCAAGATTCTAGATTTAGGATCATCCATAGAGATCTTAAAGCAAGCAACATTCTACTTGACCGAGAAATGAATCCAAAGATATCAGATTTTGGGATGGCTAGAATATTTGGCACGGATCAGACAGAAGCAAATACAGTTAGAGTCGTTGGAACATATGGCTATATGTCTCCTGAATATGCTATGGACGGAATCTTCTCGGTGAAATCTGATGTTTTTAGTTTCGGTGTTCTCGTGATGGAGATCATAAGTGGAAAAAAGAACCGAGGTTTCTATTCCGCTAACAAAGAATTGAATCTTCTCGGTCATAGTTGGAAGCTTTGGAAAGAAGAAAATGCTTTGAAACTGATTGATTCTTCCATTAATAATTCATATTCACCTTCTGAGGTTCTTAGATGCATACAAGTTGGGCTATTATGCGTACAAGAGCGAGCAGAAGATAGACCAACAATGTCTTCAGTTGTGTTGATGTTGAGTAGCGAAACAGCAACAATAGCAGAGCCGAAAAATCCTGGATTTTGCCTTGGAAGCACTCCTATTGAAACTGATTCTTCCTCGAGTAAAAAAGATGAATCCTGCACAGTGAACCAAGTTACTGTCACAATGATAGATGGCAGATAG 2580 0.3609 MKGFSVHTLFLFCLSTSTVFFSISVSSSSSSDTLTTTQILRINETLFSPKGIFQLSFFSYNNFSWYLGIRYNIDHDNNTVVWVANRNTPILNPNSFLKLTDTGNLIIIDQSNKTIWATQKINKNSTFNKNPILQILDSGNLVVSESPNENDPTKFLWQSFDFPTDTLLPGMKLGWNFDTNTETYINSWKVTDQDPSIGDISFKMDYHGVPEIFLWKNNRRIYRSGPWNGKRFSGVPEMQPVTDSIQFSFVQNEHEVYYTFSIGNESLFSRLSVDSLGELQRLTWIHSRKFWTKFWYAPKDQCDNYKECGPFGICDTNASPVCNCIKGFHPKNHQAWNLRDGSDGCLRNNVLDCDSDRFLHLVNVKLPETSNVFVNKSMSLLECSDLCKKNCSCTGYANIEIVNGGSGCVMWLDQLIDIRAYPVGGQDLFVRLAASDVDDDVIRESSDRKTARAIGIMAGGAAIILLAVGICFLWRKKKLQFLLNLKGKSERRGSLEKSQDLLITEGVFTSNREQSSENNMDELELPFFDFNTITMATNNFSEQNKLGQGGFGIVYKGRLMEGQEIAVKRLSKNSGQGVEEFKNEVKLIVKLQHRNLVRLLGCSFQMDEKVLVYEYMENRSLDAILFDKAKRFSLDWQTRFNIISGIARGLLYLHQDSRFRIIHRDLKASNILLDREMNPKISDFGMARIFGTDQTEANTVRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVMEIISGKKNRGFYSANKELNLLGHSWKLWKEENALKLIDSSINNSYSPSEVLRCIQVGLLCVQERAEDRPTMSSVVLMLSSETATIAEPKNPGFCLGSTPIETDSSSSKKDESCTVNQVTVTMIDGR 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03747 859 SMART ntp_6 353 432 IPR003609 -
Trre7g03747 859 ProSiteProfiles Protein kinase domain profile. 540 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03747 859 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 189 IPR036426 -
Trre7g03747 859 CDD PAN_AP_plant 351 433 - -
Trre7g03747 859 SMART blect_4 37 163 IPR001480 -
Trre7g03747 859 SUPERFAMILY Protein kinase-like (PK-like) 516 811 IPR011009 -
Trre7g03747 859 Gene3D Transferase(Phosphotransferase) domain 1 616 823 - -
Trre7g03747 859 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 616 819 - -
Trre7g03747 859 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 802 - -
Trre7g03747 859 ProSiteProfiles PAN/Apple domain profile. 353 433 IPR003609 -
Trre7g03747 859 Pfam Domain of unknown function (DUF3403) 813 859 IPR021820 GO:0004674
Trre7g03747 859 Pfam S-locus glycoprotein domain 222 332 IPR000858 GO:0048544
Trre7g03747 859 PIRSF SRK 4 859 IPR024171 GO:0004674
Trre7g03747 859 ProSitePatterns Protein kinases ATP-binding region signature. 546 568 IPR017441 GO:0005524
Trre7g03747 859 CDD STKc_IRAK 546 811 - -
Trre7g03747 859 Gene3D Phosphorylase Kinase; domain 1 513 615 - -
Trre7g03747 859 Pfam Receptor serine/threonine kinase 496 530 IPR022126 GO:0004674
Trre7g03747 859 Gene3D - 25 160 IPR036426 -
Trre7g03747 859 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 506 615 - -
Trre7g03747 859 CDD B_lectin 37 163 IPR001480 -
Trre7g03747 859 SMART serkin_6 540 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03747 859 ProSiteProfiles Bulb-type lectin domain profile. 31 156 IPR001480 -
Trre7g03747 859 Pfam D-mannose binding lectin 79 189 IPR001480 -
Trre7g03747 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Trre7g03747 859 Pfam Protein tyrosine and serine/threonine kinase 543 809 IPR001245 GO:0004672|GO:0006468
Trre7g03747 859 Pfam PAN-like domain 353 418 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03747 Trre-Chr7 45640366 45647412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03747 528 854 Receptor kinase-like Gene Family AT4G11530 58.434 3.37e-133 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g03747 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03747 - - cam:101504189 1419.83