Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03743 ATGGGCAAGATCTTAGGATTCAAAGTTTCATTCTTTATGTTGTTGTTCTTGTCTTTCCTCTGTTTCCTCTGTTTTTTTCCTCTGTTTTTGCATGCTGCTAACTCGATTACAAAGAATGAATCTATCAAAGATGGTTCCACTTTGGTGTCAGATGGTCTTAAATTTGAAATGGGTTTCTTCAGTTTGAATGATTCTTCTTCAAGATACGTTGGAATTTGGTATCACAACGTTGCTTCAGCATATGTGTGGGTTGCAAACAGAGAAAAACCTATCAAAAACAGAGAAGGGTCTATCACAATAAAAAATGATGGTAACTTGGTTGTTCTTGATGGTGAAAACAATGAGATTTGGTCAAGTAACGTATCGAAAACTCCGATAAATAACTCACAAGTTGTTCTTCGTAATGATGGAAATCTTGTTCTTTCAGATAGAGATATTAAAAAAGATATTTGGCAAAGTTTTGAAGATCCAACTGATACATATCTTCCTGCTATGAAAGTTCCGGCTAGCGGTGGAAGTGGAATTGGAAAGGATGCTACTTTTTGTTCATGGAAATCAGAGAATGATCCTTCATTTGGAAACTTTTCAATGAGTGTTGATTCTGAAGCTTCACCACAGATAGTGATTATGGAAGGAGAAAAAAGAAGGTGGAGAAGTGGTTATTGGGATGGTAGAGTTTTCACAGGTGTACCAAATATGACAGGAAGTTATCTTTTCGGTTTTCGGCTTAACACGGATGATAATGGTGAAAGGTATTTTGTTTATGAAGCATTGAATAGTACTGATAAGATAAGGTTTCTGATTAGTTATGATGGATTTGAGAAACAATTTAGGTGGAATGAAAATCAGAAAAATTGGAATATGTTACAAAGTCAGCCTTTTAAGAAGTGTGAGTTTTATAATCCATGTGGTTGTTTTGCAGTATGTGATGAATCTGATTCAAGTTTGTGTAAGTGCATAAAAGGGTTTGAACCAAGAGATATGAATGGTTGGAAAATTGGGAATTGGTCAAAAGGGTGTAAGAGGATGACACCATTGAAAGGTGAGAGAAGTAGTAATAGTTCTGGTGGAGAAGATGGTTTTTTGGTGCAAAGGGATTTGAAGTTACCTGATTTTGCACATTTGGTGAGTGCTGTTGATAGTAAGGATTGTGAAGATAATTGTGTGAAGAATAGTTCTTGTACTGCTTATGCTAATGCTATTGGAATTGGGTGCATGGTTTGGTTTGGGGATTTAGTTGATTTTCAAAGGTTGGAAAATTCTGGAAATACACTCAACATTCGTCTTGCTGATTCCGATTTAGGTGATGGGGGGAAAAAGACCAAAATTGGGATAATACTAGGTGTTGTGGGGGGACTTATCTGCCTTGGAATCTTTGTATGGCTACTATGGAGGTTTAAGAGAAAACTCAAAGTTTCCTCAACATCTTCTTCCAACATTAATGGTGATGTGCAAGTTTCTGAACCATCCAAGAGTACAAACTTATTACTATCAGCAGAATTATCAGGACCGGTTGGTCTTAGTCCTCAAGGGAGTCCACTCAATAATGCAGAACTTTCATTCTTCAATTTTAGTATCATTGAAATAGCAACAAACAATTTTTCAGAAGAAAATAAGCTCGGACAAGGCGGATTTGGTCCTGTTTATAAGGGAAAGCTTCCCGGAGGAAAAGAAATCGCGGTCAAGAGGCTTTCTAGACAGTCGAACCAAGGATCAGATGAGTTCAAGAATGAAATGATGCTTATAGCCAAATTACAGCATAGAAATCTTGTTAGCCTATTGGGATGTTCAACTGAAGGGGAAGAAAAGTTACTAGTATATGAATACATGCCAGACAAAAGCTTGGACCGCTTTTTATTTGATCCAGTCAAGCAAACAATACTCGATTGTACAAAACGTTTTGAAATCATCGAGGGAATTGCAAGAGGACTACTTTATTTGCACCGTGATTCTCGGCTTAGAATAATCCATCGTGATCTTAAAGCAAGCAACATTTTGTTGGATGAAAATATGAATCCAAAAATTTCAGATTTCGGCTTGGCTAGGATATTTGGGGGAAACCAAAATGAAGATAATACAAACAAAGTTGTTGGTACATATGGTTATATGTCTCCTGAATATGCAATGGAAGGTCTATTTTCAGTCAAATCTGATGTCTATAGTTTTGGCGTACTACTACTAGAGATTTTGAGCGGTCGCAAAAACACTAGCTTTCGTGATTCTTATGACCCAAGTCTCATAGGATATGCGTGGCGTCTATGGAATGAAGAGAGAGTAATGGAGCTTCTTGATCCTTCGATCCGTGATTCGAGTCCAAAGATTAAAGCTTTGAGATGCATACACATAGGGATGTTATGTGTGCAAGATTCAGCATCTAATAGACCAAACATGTCATCAGTGGTGTTGATGCTGGAAAGTGAGGCAACAACTCTTCCTTTGCCAGTCAAACCTTTGCTTACTTCAATGAGAAGATATGATGATACAGAAGAATTTCATACTGAACCCTTTGATTCCACAGTTGATCTTACAGTGTCAGGAAGATAA 2544 0.3722 MGKILGFKVSFFMLLFLSFLCFLCFFPLFLHAANSITKNESIKDGSTLVSDGLKFEMGFFSLNDSSSRYVGIWYHNVASAYVWVANREKPIKNREGSITIKNDGNLVVLDGENNEIWSSNVSKTPINNSQVVLRNDGNLVLSDRDIKKDIWQSFEDPTDTYLPAMKVPASGGSGIGKDATFCSWKSENDPSFGNFSMSVDSEASPQIVIMEGEKRRWRSGYWDGRVFTGVPNMTGSYLFGFRLNTDDNGERYFVYEALNSTDKIRFLISYDGFEKQFRWNENQKNWNMLQSQPFKKCEFYNPCGCFAVCDESDSSLCKCIKGFEPRDMNGWKIGNWSKGCKRMTPLKGERSSNSSGGEDGFLVQRDLKLPDFAHLVSAVDSKDCEDNCVKNSSCTAYANAIGIGCMVWFGDLVDFQRLENSGNTLNIRLADSDLGDGGKKTKIGIILGVVGGLICLGIFVWLLWRFKRKLKVSSTSSSNINGDVQVSEPSKSTNLLLSAELSGPVGLSPQGSPLNNAELSFFNFSIIEIATNNFSEENKLGQGGFGPVYKGKLPGGKEIAVKRLSRQSNQGSDEFKNEMMLIAKLQHRNLVSLLGCSTEGEEKLLVYEYMPDKSLDRFLFDPVKQTILDCTKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEDNTNKVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEILSGRKNTSFRDSYDPSLIGYAWRLWNEERVMELLDPSIRDSSPKIKALRCIHIGMLCVQDSASNRPNMSSVVLMLESEATTLPLPVKPLLTSMRRYDDTEEFHTEPFDSTVDLTVSGR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03743 847 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 795 - -
Trre7g03743 847 ProSiteProfiles PAN/Apple domain profile. 340 430 IPR003609 -
Trre7g03743 847 Pfam Protein tyrosine and serine/threonine kinase 537 802 IPR001245 GO:0004672|GO:0006468
Trre7g03743 847 PIRSF SRK 7 845 IPR024171 GO:0004674
Trre7g03743 847 Gene3D - 29 154 IPR036426 -
Trre7g03743 847 SMART blect_4 39 157 IPR001480 -
Trre7g03743 847 SMART serkin_6 534 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03743 847 Gene3D Phosphorylase Kinase; domain 1 511 609 - -
Trre7g03743 847 ProSiteProfiles Protein kinase domain profile. 534 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03743 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Trre7g03743 847 Gene3D Transferase(Phosphotransferase) domain 1 610 811 - -
Trre7g03743 847 CDD STKc_IRAK 540 805 - -
Trre7g03743 847 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 190 IPR036426 -
Trre7g03743 847 SUPERFAMILY Protein kinase-like (PK-like) 519 830 IPR011009 -
Trre7g03743 847 Pfam D-mannose binding lectin 81 185 IPR001480 -
Trre7g03743 847 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 508 609 - -
Trre7g03743 847 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 610 812 - -
Trre7g03743 847 CDD B_lectin 39 157 IPR001480 -
Trre7g03743 847 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 154 - -
Trre7g03743 847 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Trre7g03743 847 SMART ntp_6 356 429 IPR003609 -
Trre7g03743 847 CDD PAN_AP_plant 354 430 - -
Trre7g03743 847 ProSiteProfiles Bulb-type lectin domain profile. 33 154 IPR001480 -
Trre7g03743 847 Pfam PAN-like domain 357 414 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03743 Trre-Chr7 45560339 45563818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03743 522 817 Receptor kinase-like Gene Family AT4G23230 60.943 6.34e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g03743 PK_Tyr_Ser-Thr 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03743 - - cam:101504189 1321.99