Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03730 ATGGCTTCTAAAAATGGCTTATACAAAGCAAGTGAGCTTTTCCAAGCACAAGCTCACTTGTACAAAGTGATGTACAGCTTCCTCAATCCAATGTCTGTCAAATGGGCCATTGATCTTAAAATACCAGATATCATCCACAATCATGCCCAACCCATTACTCTTTCTGAACTTGTTTCAGCTCTACAAGTTCCACAATCCAAACAAACATGCGTCCAACGACTCATGCGATTATTAGCACATATTGATTTCTTTGCTATTGTCAAAATTGATAAAGACAACAAAGAAGCATATGCTCTTACTCCAACATCACAACTTCTTGTCTCTGGCACTGATCATTGTTTATCTTCCATGGTTCGGTTTCTAAACACTACCATTCTTGTTGATTCGTATAATCATTTAGCGAAATGGACTTCTGGGGAGGATCTCACAGTTGTTGAGACTGCATTAGGCCCAGAAAGTTATTGGGATTTCATTCATCAAAATTCTGCATACTTGAATACTTTCAATGAGGCTATGGAAAGTGATTCTCATGTTGTGAGGTTGGCTTTGAAAGATTGTAGGTCTGTTTTTGAAGGGATTGGTTCGTTGGTCGATGTTGGTGGTGGAACTGGAAACACAGCTAAGATTATATGCGAGACATTTCCGGAGCTCAAGTACATTGTCTTGGACCTTCCACAGGTTGTTTCCGGTTTAACAAGAACCAATAACTTGAGTTTTGTTGGTGGGAACATGTTTAAGTCTATCCCTCAAGCCGATGCTGTTTTGCTCAAGTGGGTGTTACACAATTGGAGTGATGATGATTGCATAAAGATACTCAAAAATTGCAAGAAAGCTATATCAGGAAAAGGGGAAGGAGGAAAAGTTATCATCATAGATGTAGTAATAAATGAAAAACAAGATGAGCATGAAATGACAGAAGTAAAGCTTTTACTTGATGTGATTATGATGACCAGTCTCAATGGTAAAGAGAGAAATGAAAAGGAATGGAAGCAACTTTTCCTACAAGCAGGCTTCAAATCTTACAAGATATTCCCTACATTTGGTTTTAGGTCTCTTATTGAGCTTTATCCTTAA 1074 0.3808 MASKNGLYKASELFQAQAHLYKVMYSFLNPMSVKWAIDLKIPDIIHNHAQPITLSELVSALQVPQSKQTCVQRLMRLLAHIDFFAIVKIDKDNKEAYALTPTSQLLVSGTDHCLSSMVRFLNTTILVDSYNHLAKWTSGEDLTVVETALGPESYWDFIHQNSAYLNTFNEAMESDSHVVRLALKDCRSVFEGIGSLVDVGGGTGNTAKIICETFPELKYIVLDLPQVVSGLTRTNNLSFVGGNMFKSIPQADAVLLKWVLHNWSDDDCIKILKNCKKAISGKGEGGKVIIIDVVINEKQDEHEMTEVKLLLDVIMMTSLNGKERNEKEWKQLFLQAGFKSYKIFPTFGFRSLIELYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03730 357 Gene3D - 2 106 IPR036388 -
Trre7g03730 357 PANTHER O-METHYLTRANSFERASE 12 342 IPR016461 GO:0008168
Trre7g03730 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 357 IPR016461 GO:0008168
Trre7g03730 357 SUPERFAMILY "Winged helix" DNA-binding domain 11 109 IPR036390 -
Trre7g03730 357 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Trre7g03730 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 355 IPR029063 -
Trre7g03730 357 FunFam Coniferyl alcohol 9-O-methyltransferase 3 106 - -
Trre7g03730 357 Pfam O-methyltransferase domain 131 339 IPR001077 GO:0008171
Trre7g03730 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Trre7g03730 357 FunFam O-methyltransferase ZRP4 108 357 - -
Trre7g03730 357 Gene3D Vaccinia Virus protein VP39 108 357 IPR029063 -
Trre7g03730 357 CDD AdoMet_MTases 196 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03730 Trre-Chr7 45404582 45405989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03730 30 355 Monolignol Biosynthesis Gene Families AT5G54160 32.132 2.92e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03730 K22588 K13262 gmx:100818947 436.417