Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03724 ATGGTTGATATAATGAAGATTGAGTTGCACAATTTTTGTGTAGCCGATATACGGAAGTATGAATTTGTTGGGTTGGATGTTGCATACATGTTTTATTGTTGGTTTGCCAAGTTATGTGGGTTCTCTGTTCGCAAAGGGCATGTGGTTAAAAATCGCGATGGGAACATTATACAACACACATTTTTATGTTCAAGTGCTGGCTTTAGAGAGGATAGAGGATTAAGTTTGGAGAAACGAAAGGGTGAGGTAAAGAATGAAACAAGATGTGGGTGTGATGCAAGATTTAAAGTTCCCCTAGACATTGTATCTATGCGATGGTATGTAACTCTACTTGAAATTGATCACAAGCATGACTTACTAGGTGGTACATTGTGTGGCTTACAACCAACACATCGAAAGATGAGTCAAAGTGATATAAATGAAATTGAACGTAACCGGAAAGCGGGGATAAGGCCACATATCGGAAAAACAAATACAACTGTCCATTTGTAG 492 0.3821 MVDIMKIELHNFCVADIRKYEFVGLDVAYMFYCWFAKLCGFSVRKGHVVKNRDGNIIQHTFLCSSAGFREDRGLSLEKRKGEVKNETRCGCDARFKVPLDIVSMRWYVTLLEIDHKHDLLGGTLCGLQPTHRKMSQSDINEIERNRKAGIRPHIGKTNTTVHL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03724 163 Pfam FAR1 DNA-binding domain 31 120 IPR004330 -
Trre7g03724 163 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 20 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03724 Trre-Chr7 45331693 45332184 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre7g03724 FAR1 5.3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03724 - - tpra:123884554 206.838