Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre7g03720 | ATGAGGCTACTGTTCGGCATTGGCCATAACGGCGATTTTCCAGTGGCTGTCTGTCTCCATGAAAAGGCTTTTCTTTCTGCAAACAGAGCATTTGTGGCTGAGAGATCAGCAGCAGGAAAGAGAGGCAAAAGTCTCTTCTTGCGGAAGAGAAAGTCCAGTTGCACAAATGCACAAGCTGCCTATGTTTATAAGCTGCAGGAGAATCTGGATTCACTGAATCAAAAATGGAATGATCTTCAAAACAAGGAAAAGGATGTAAGAACTGAAATTGATAGAGCTGAGAGCACAGGAATGAAGAAAAGGACAAATGAAGTGATTGGTTGGCTTCAGGAATTTCAAAAACTTCAAGAGAAAATGGTGAAAGATATTCCGAATTCTCAAGAAGTTCAAAGTAACAAATGTCTGAATGGTTACTGCCCAAAGAACTGTGTGTCAAGCTACAAGTTGGGAAAGAAAATTGTTGAGAGGATCAATGAGGCAAATGACATACTTTCTAAAGCTGGAAATATGCAGATTGCTATCGTGCAACCACCTAAACCTGTAGATGAGATGCCTTGTGATGAGACAGTAGGCTTGGACTTGATGATCCAGAAAGTATGGAATAGTCTTGAAGATGATAAGGTGGGTATAATTGGTTTATATGGAATGGGCGGGGCCGGAAAAACTACCCTAATGAAGAGAATTCAAAGTGAATTAGGAAAAACGGAGCATAGTTTTGATCTAGTGTTGTGGGCAGTGGTTTCTAAAGATTGTGATATCAATAAAACCATGACCGACATCAGCAATAGGTTAGGGATCGATGATGGTTTTTGGAAAAGAAGTAGTGAAGACCAAAGAGTAGCCAAAATTTATGAACAATTGAAAGCAAAGAAGTTTTTGTTGATGTTGGATGATTTGTGGGTGAAGCTAGAGTTAGAAAGGTTAGGAGTTCCAGTTCCAAAAGAAACTAACAACAAATCAAAAGTAATGTTCACAACAAGGTCTGAGGATGTGTGTGCTAAAATGCAAGCTCAAAAGAAATTCAAGGTGGAATGTTTATCAGAGAAAGAAGCATTTGATTTGTTTAGTAAGAAAGTAGGTGAGGAGACTTTAAGATGTAACACAGAGATCCCAAAGCTAGCGCTGGAAATGGCTAAAGAATGCAGAGGATTGCCGCTAGCATTAATCACTGTGGGAAGTGCCATGGCTGGAGTGGAAAGTATTGAAGCTTGGTTGGTTGCGAAAAATAATTTGAGGAGTTCTTCGTGGATAGCCTCAGATTTGGAGGATAAAGTTTTTCGTATTCTCAAGTTTAGCTACGACAAACTTCCAGATAAGGCACATAAAAGTTGTTTCTTGTACTGCGCACTATACCCAGAAGATTTTGAATTAGAAGTTGATGAACTTATTGATCGATGGATCGCTGAGGGATTTATTGATAAAGATGGTAAGAGTATATATGATATGTACGACCAAGGGAAAGCTATTCTTGAAAAATTAATACTTTCGTGCCTATTAGAGGAGAGTATTGAAACTAGATATCGCATTTATGTGACTAACAGGATAGTTAAGATGCATGATGTGATTAGAGATATGGCACTATGGGTATCTCGAGATAAAGATAAAAACAAAGACAAAATTGTAGTTCAAGGGGAAGCATTTTCCATGCCAGAAATGGATTCTGAAAGATTAAATGTGGTCGAGAGGATTTCAATAATAACAGCTACTATGGATTTTAAAAGAAACTGGAATATACCGGCTTGTCCAAATCTCACCACCCTTTGTATAAGAATTAAGCCACTATCCATCCGTGCTCCTGGTTTATCATTAAATTTCCAATCCATAAAACGGTTGAGGGTGTTTGATTTATCAAGTGATTATTCTGATAAACTACTCTCCTCAGAAATAGGTGAGTTAATCAACTTGGAATACATTAACCTCTCAGGAACATCAATAGTTCGTTGGCCTATTGAATGGAAGAAGTTGAAAAAATTGAGGGTATTCCTTATGGATGATATGCCAAGTGATTATGGTGTTGTTGAATTTCCTTCAGAAGTATTAGAAAGTCTTGAACAATTAAGGGTGTTTAGATTTTCTAGAATAACTAGAACTGTGGATACAGGAAACTTTGTACAAGGAGAGATATCATTACTAGAGAAGCTAGAATCCTTACCAAAATTGGAGGAACTATGCATCCATCTAACTTCCAACACTAGTGTGCAGAGACTACTTCAATCCACCAAATTAATGGCTTGTTCAAGACGTCTCAAGCTTTCTTACAATTATGATGACAACTTCAAGCAAGACACACTTGAACTGTCAACATTATTAGCAACTATGTCAAAAATGAAGCATTTGGAAACCATATATATTTGGATGATGCACTGCATCATGGATGGTTCACTGGTTACTGACAAATGGCATCTTGGCAAGCTTCGCCAAGTCTTCATATATTTTGTTCAGGGTTCAATAACTCATTTGACGTGGTTGAGGTATGCTCCACTTCTCGAGCAACTTGTTCTTTTTAGTTGTCATTCAATTGAACATGTGGTGAAGGATGATAATGAAGAAGTTGGCTCAAAGTCCAACAATGATAATATATTCACAAATCTTAAAGAACTTCTCATTGATAATTTGCCAAAGCTAGTGAGCATCCACAAGAGAGCTCTGGCTTTTCCTTCCCTAAAACATATTCAGGCAACTAGTTGCCCTAATCTGAGCAAGCTTCCTCTCAATTCCAGCTTTGCTTCCAAAAACAACTTGATTGCAATCCAAGGAGAGACCAGATGGTGGAACAGTTTAAAGTGGGATGATAATATTATGGAACACCTACTACGCCCTAAATTTATAAGTATATAG | 2838 | 0.3781 | MRLLFGIGHNGDFPVAVCLHEKAFLSANRAFVAERSAAGKRGKSLFLRKRKSSCTNAQAAYVYKLQENLDSLNQKWNDLQNKEKDVRTEIDRAESTGMKKRTNEVIGWLQEFQKLQEKMVKDIPNSQEVQSNKCLNGYCPKNCVSSYKLGKKIVERINEANDILSKAGNMQIAIVQPPKPVDEMPCDETVGLDLMIQKVWNSLEDDKVGIIGLYGMGGAGKTTLMKRIQSELGKTEHSFDLVLWAVVSKDCDINKTMTDISNRLGIDDGFWKRSSEDQRVAKIYEQLKAKKFLLMLDDLWVKLELERLGVPVPKETNNKSKVMFTTRSEDVCAKMQAQKKFKVECLSEKEAFDLFSKKVGEETLRCNTEIPKLALEMAKECRGLPLALITVGSAMAGVESIEAWLVAKNNLRSSSWIASDLEDKVFRILKFSYDKLPDKAHKSCFLYCALYPEDFELEVDELIDRWIAEGFIDKDGKSIYDMYDQGKAILEKLILSCLLEESIETRYRIYVTNRIVKMHDVIRDMALWVSRDKDKNKDKIVVQGEAFSMPEMDSERLNVVERISIITATMDFKRNWNIPACPNLTTLCIRIKPLSIRAPGLSLNFQSIKRLRVFDLSSDYSDKLLSSEIGELINLEYINLSGTSIVRWPIEWKKLKKLRVFLMDDMPSDYGVVEFPSEVLESLEQLRVFRFSRITRTVDTGNFVQGEISLLEKLESLPKLEELCIHLTSNTSVQRLLQSTKLMACSRRLKLSYNYDDNFKQDTLELSTLLATMSKMKHLETIYIWMMHCIMDGSLVTDKWHLGKLRQVFIYFVQGSITHLTWLRYAPLLEQLVLFSCHSIEHVVKDDNEEVGSKSNNDNIFTNLKELLIDNLPKLVSIHKRALAFPSLKHIQATSCPNLSKLPLNSSFASKNNLIAIQGETRWWNSLKWDDNIMEHLLRPKFISI | 945 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre7g03720 | 945 | PRINTS | Disease resistance protein signature | 210 | 225 | - | - | |
Trre7g03720 | 945 | PRINTS | Disease resistance protein signature | 630 | 646 | - | - | |
Trre7g03720 | 945 | PRINTS | Disease resistance protein signature | 286 | 300 | - | - | |
Trre7g03720 | 945 | PRINTS | Disease resistance protein signature | 381 | 395 | - | - | |
Trre7g03720 | 945 | Gene3D | - | 177 | 345 | IPR027417 | - | |
Trre7g03720 | 945 | PANTHER | NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED | 70 | 909 | - | - | |
Trre7g03720 | 945 | Gene3D | Ribonuclease Inhibitor | 549 | 935 | IPR032675 | - | |
Trre7g03720 | 945 | Gene3D | - | 346 | 432 | IPR042197 | - | |
Trre7g03720 | 945 | FunFam | Probable disease resistance protein At1g61300 | 173 | 340 | - | - | |
Trre7g03720 | 945 | Coils | Coil | 62 | 89 | - | - | |
Trre7g03720 | 945 | FunFam | Probable disease resistance protein At5g66910 | 345 | 432 | - | - | |
Trre7g03720 | 945 | FunFam | Probable disease resistance protein At1g63360 | 433 | 528 | - | - | |
Trre7g03720 | 945 | Gene3D | - | 433 | 527 | IPR036388 | - | |
Trre7g03720 | 945 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 185 | 448 | IPR027417 | - | |
Trre7g03720 | 945 | SUPERFAMILY | L domain-like | 517 | 914 | - | - | |
Trre7g03720 | 945 | Pfam | NB-ARC domain | 195 | 434 | IPR002182 | GO:0043531 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre7g03720 | Trre-Chr7 | 45280254 | 45287965 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre7g03720 | 194 | 526 | WRKY Transcription Factor Family | AT5G45050 | 23.599 | 1.08e-06 | 50.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre7g03720 | - | K13459 | psat:127102790 | 1096.26 |