Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03715 ATGGGTGAAGAAGATTTAATCGGAGATTCTCAATTGGCGGGTGTACCCACCGGAGCTTGTCGTCTCCGGTGTGCTGTGGAACTCATTTGTTCGTTGCTATCTCTTTCTCTGTCGATTAGAGTTTTCATCGGAAAATGGCAACTCATTCGTAACAAGCTTGAAGAGCTTCATTCTGGTTTAATCGCCGCTGAGAATTGCGATTCCGGTGATAATCCGTCGCTTTTAAGGTTAGTAACTTCGATAATAGCGACGGTTAGTGAGTGTCACGATCTGGGTCAGCGTTGTGTTGATGATTCGTATAGTGGGAAGCTTTTGATGCAGAGTGATTTGGACGTAGCGTTAACGAAACTTGATGGTTTAGCGAAGAAGCTTTCGGAGATATACAAAACGGGTCTTTTAACAAATGGGTTTGCGCTTGTTGTTTCAAAACCGTGTCTTGGTGCTTCTAAAGAGGATATGAGGTTTTATGTTAGAGACCTTTTGACGAGGATGAAGATTGGTGATTTGGGTATGAAGAAACTAGCTTTGAGGAATCTTCTTGAGGTTGTTGTTGAGGATGAGAAGTATGTGAAGGTTATTGCTGTTGATGTGAGTGATGTTGTTCATGTGCTTGTTGGGTTTTTGGGTTCTGCTGAGGTTGAAATTCAAGAGGAGAGTGCTAAGGTTGTTTCTGTTGTTGCTGGTTTTGATTCATATAAAGGGGTTTTGATTAGTGCTGGTGTTATTGCGCCTTTGATTCGTGTTTTGGATTGTGGGAATGAGTTGGGGAAAGTTGCGTCTGCGAGGTGTTTGATGAAATTGACCGAGAATTCGGATAATGCTTGGGCTGTTTCTGCTCATGGTGGTGTCACTGCTTTGTTGAATATTTGTGGTAATGATGATTGTAAAGGTGATTTGGTTGGTTTTGCTTGTGGGGTGTTGAGAAATCTTGTTGGTGTTGAGGAAGTTAAGAGGTTTATGGTCGAGGAGGATGCCGTGTCTACGTTTATCAGGCTTGTGAAATCAAAGGAGGAAGCAGTTCAGGTGAATTCAATAGGGTTCATTCAGAATATTGCCTTTGGAGATGAGGTGATTAGACAAATGGTGATTAGAGAAGGCGGACTTCGTGCTTTGTTACGCGTTTTGGATCCTAAATGGTCCTATTCTTCGAAAACAAAGGAAATGGCAATGAGGGCTATTGAGAGTTTGTGTTTTACTTCATCTAGTTCTATAAGTATTTTAATGAGTTATGGTTTTGTGGATCAATTATTATACTTTGTTCGAAGTGGTGAAGTTTCAATTCAAGAGTTGGCATTGAAAGTGGCATTTAGATTATCTGGAACATCTGAAGAAGCTAAGAAAGCAATGGGAGATTCTGGTTTTATGGCAGAATTTGTTAAGTTTCTAAATGCAAAATCATTCGAACTACGCGAAATGGCAGCCGAAGCACTCTCTGGCATGGTCACGGTACCTAAAAATCGTAAGAGATTTGTACAAGATGACAATAACATACCCCTGCTTCTTCAATTGCTTGACCCAGAAGAGGGAAATTCAGGTAACAAAAAGTTCTTAATATCAATTTTATCATCATTGACAAGTTGCAATAGTGGAAGGAAAAAGATTGTTAGTTCTGGTTATGCAAAAAACATAGACAAATTAGCAGAAACTGAAGTTTCTTCTGATGCTAAAAAACTTGTCAAGAAACTATCAACAAACAGGTTTCGCAGTATGTTGAATGGAATCTGGCACTCATGA 1734 0.4002 MGEEDLIGDSQLAGVPTGACRLRCAVELICSLLSLSLSIRVFIGKWQLIRNKLEELHSGLIAAENCDSGDNPSLLRLVTSIIATVSECHDLGQRCVDDSYSGKLLMQSDLDVALTKLDGLAKKLSEIYKTGLLTNGFALVVSKPCLGASKEDMRFYVRDLLTRMKIGDLGMKKLALRNLLEVVVEDEKYVKVIAVDVSDVVHVLVGFLGSAEVEIQEESAKVVSVVAGFDSYKGVLISAGVIAPLIRVLDCGNELGKVASARCLMKLTENSDNAWAVSAHGGVTALLNICGNDDCKGDLVGFACGVLRNLVGVEEVKRFMVEEDAVSTFIRLVKSKEEAVQVNSIGFIQNIAFGDEVIRQMVIREGGLRALLRVLDPKWSYSSKTKEMAMRAIESLCFTSSSSISILMSYGFVDQLLYFVRSGEVSIQELALKVAFRLSGTSEEAKKAMGDSGFMAEFVKFLNAKSFELREMAAEALSGMVTVPKNRKRFVQDDNNIPLLLQLLDPEEGNSGNKKFLISILSSLTSCNSGRKKIVSSGYAKNIDKLAETEVSSDAKKLVKKLSTNRFRSMLNGIWHS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03715 577 Gene3D - 156 566 IPR011989 -
Trre7g03715 577 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 281 325 IPR000225 GO:0005515
Trre7g03715 577 SMART arm_5 229 269 IPR000225 GO:0005515
Trre7g03715 577 SMART arm_5 270 312 IPR000225 GO:0005515
Trre7g03715 577 SMART arm_5 354 398 IPR000225 GO:0005515
Trre7g03715 577 SMART arm_5 313 353 IPR000225 GO:0005515
Trre7g03715 577 SMART arm_5 442 482 IPR000225 GO:0005515
Trre7g03715 577 SMART arm_5 186 228 IPR000225 GO:0005515
Trre7g03715 577 SUPERFAMILY ARM repeat 158 559 IPR016024 -
Trre7g03715 577 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 17 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03715 Trre-Chr7 45229766 45231499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03715 204 434 U-box Gene Family AT3G54790 26.809 8.21e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03715 - - gmx:100809382 859.366