Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03690 ATGCATGGGAGGTACGTTGATATGCCGAGGGAGAAGAGAAGTTTGGATTCCAGTTCCGGTGAAGATGGACAGCCTGATCGGAAACGTCCTGCTTTAGCTAGTGTAATTGTTGAAGCCCTGAAGGTGGACAGTCTGCAGAAACTGTGTTCATCACTGGAGCCTATTCTACGCAGAGTTGTTAGTGAAGAAGTAGAGCGTGCTTTGGCAAAACTAGGTCCAACCAAGCTTAATGGGAGGTCTTCTCCAAAGCGCATAGAAAGCTCTGATGGCAAAAATTTACAATTGCACTTCAAGACCAGACTATCCCTTCCCCTTTTTACTGGTGGGAAAGTGGAGGGTGAGCAAGGGGCAACCATACATATTGTTTTGGTTGATGCAAACTCAGGCCAAGTTGTCGCATCAGGCCCAGAGTCATGTGCCAAATTAGATGTCTTTGTTCTTGAGGGGGATTTCAATAACGAGGATGATGAAAATTGGGGTGAAGAAGAGTTTGAGAGTCATATTGTGAAAGAGCGAGAAGGAAAAAGGCCTCTTCTGTCTGGCGATCTGCAAGTCACACTAAAGGAGGGTGTAGGGACACTGGGTGAGATCTCATTTACTGACAACTCCAGCTGGATAAGGAGTAGGAAGTTCAGATTGGGGCTGAAAGTTGCCTCAGGTTTTGGTGAAGGAATGCGTATTCGTGAAGCCAAATCAGAAGCTTTCACTGTTAAGGATCACCGCGGAGAATTATACAAGAAACACTATCCACCTGCCTTGCATGATGAGGTTTGGAGACTGGAGAAGATTGGTAAGGATGGTTCATTTCACAAAAGACTAAATAAAGCAGGAATATTTAATGTTGAAGACTTTCTAAGACTTGTGATCAGAGACTCTCAGAGATTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATATCCTTGTTGAGCACGCAAAGACTTGTGTACTCGGTGGAAAACTCTATGTATATTATCCCGAGGATGCAAGAAACGTTGGTGTTGTTTTCAATCACATTTATGAATTGAGCGGCTTAATTGCCAATGACCAGTATTACCCAGCTGATTCTCTCTCTGAGAGTCAAAAGGTTTATGTGGACACGTTGGTGAAGCAAGCATATGATAATTGGATGCATGTTATCGAGTATGATGGGAAGTCTCTACAAAATTGCAATCAGGATCAAAATTTGGATACAGCTCATCCTCAAGCTCTCATGGGTTCCCTTGAGTACTCAAACTCAGTTCAGCAGACTTCTATCCATAGTTTGCCACAACCAGAACATAGAGGCCAACCTTCAATGGATACAGGAGCAACAGTTGGAGGTTATCATGAGAGCACAACTACCAGCTTCTCCGTGCAATCACAGAATACTAATCTTAATTCTTCTATCCAATTTGATGATAATGCATTCTCACTACAAAGCCAGTTGATGAGTGTTCCCCACCAAGTTCAACTTCCAAGAAATGAAAATGGGCTAAGTCTTGGTGTGCCACAAACAGCCACACATGGGTTCCAGACTGCCAGCATTTCAAATTCAACGTACGGAGGGGTTGAAGACTTCTTCCCAGAGGAAGAAATACGCATTAAAAGTCACGAGATTCTAGAAAATGAAGATATGCAGCATCTTCTCCGTATTTTTAACTTGGGAAGCCATGCACATGCGTCCTTCAATGCTCACGAAGATGGGTACCCTAATTCATCTGCTTACATGCCTGCAAACCACATGAGCTACAACTTTGATGATGAGCCAAACCGTTCCTCAGGCAAAGCTGTTGTGGGATGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGTATTTTTGTTCAGAAGAGGGCTGCTGACAGACGGGCTCAACTCATTGAATTAGATGACTCTTAA 1884 0.4379 MHGRYVDMPREKRSLDSSSGEDGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPTKLNGRSSPKRIESSDGKNLQLHFKTRLSLPLFTGGKVEGEQGATIHIVLVDANSGQVVASGPESCAKLDVFVLEGDFNNEDDENWGEEEFESHIVKEREGKRPLLSGDLQVTLKEGVGTLGEISFTDNSSWIRSRKFRLGLKVASGFGEGMRIREAKSEAFTVKDHRGELYKKHYPPALHDEVWRLEKIGKDGSFHKRLNKAGIFNVEDFLRLVIRDSQRLRNILGSGMSNKMWDILVEHAKTCVLGGKLYVYYPEDARNVGVVFNHIYELSGLIANDQYYPADSLSESQKVYVDTLVKQAYDNWMHVIEYDGKSLQNCNQDQNLDTAHPQALMGSLEYSNSVQQTSIHSLPQPEHRGQPSMDTGATVGGYHESTTTSFSVQSQNTNLNSSIQFDDNAFSLQSQLMSVPHQVQLPRNENGLSLGVPQTATHGFQTASISNSTYGGVEDFFPEEEIRIKSHEILENEDMQHLLRIFNLGSHAHASFNAHEDGYPNSSAYMPANHMSYNFDDEPNRSSGKAVVGWLKLKAALRWGIFVQKRAADRRAQLIELDDS 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03690 627 MobiDBLite consensus disorder prediction 421 447 - -
Trre7g03690 627 Pfam Calmodulin binding protein C-terminal domain 323 385 IPR046829 -
Trre7g03690 627 Pfam Calmodulin binding protein central domain 252 318 IPR046830 -
Trre7g03690 627 MobiDBLite consensus disorder prediction 1 28 - -
Trre7g03690 627 MobiDBLite consensus disorder prediction 1 30 - -
Trre7g03690 627 Pfam Calmodulin binding protein-like N-terminal domain 93 240 IPR046831 -
Trre7g03690 627 PANTHER OS02G0177800 PROTEIN 10 542 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03690 Trre-Chr7 44710310 44714663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03690 7 622 Calmodulin-binding Proteins AT5G57580 60.031 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03690 - - gmx:100812605 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03690 7 44710310 44714663 Trre3g00382 3 2486434 2491900 PCT