Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03644 ATGGACAATCTAGTAGTATTAAAGTTGAAGAGTTTATACACTTTGGTTATTTTACTTTTTGTACTATGTTTTAAGCTTTCTGTTTCTTCTAGATCACATAGGCACTATTATGGTGGTGGAAGAAAATTGAGAAGCTCTAGTGATAATGGTAGTGATCTTGTCACTAATTTACCTGGTCAGCCTCATGTAGATTTTAAGCACTATGCTGGTTATGTCACTGTCAATGAAACCAATGGAAGAGCACTCTTTTATTGGTTCTATGAGGCTATGACTAAGCCAGAAGAGCAACCATTGGTGTTATGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTAGGATATGGAGCAACACAAGAGATTGGTCCATTTTTAGTAGATAATAATAATGATGGACAAGGCCTTAAATTTAATAACTTCTCATGGAACAAAGAAGCCAACATGTTATTCTTAGAATCTCCGGTCGGAGTTGGCTTTTCATACTCAAATACAACCAGTGATTATGAACAATTGGGTGATGATTTAACAGCTAATGATGCTTACAATTTTCTACACAATTGGTTCCTTAAGTTTCCATCATATAGAACTAAGACATTTTACATAGCAGGGGAGAGTTATGCAGGAAAGTATGTACCAGAACTTGCTGAACTTATCCATGATAGGAACAAGGACCCATCTCTTTACATTGATCTCAAGGGTATTTTGCTAGGTAACCCTGAAACATCTGATGCAGAGGATTGGATGGGACTAGTTGATTATGCTTGGAGTCATGCAGTGATATCTGATGAAACTCACAAAACAATTAAAACAAATTGTGATTTTAATAGTAGTGATCCATGGAAAAATGAAGATTGTGATCAAGCTGTTGATGAAGTACTTAAACAGTATCATGAAATTGATATCTATAGTCTTTACACCTCTGTTTGTTTTGCCTCTACAGCACGTTCAAATGGTCAAACAATGCAAACTTCCACCAAACGTTCATCTAAAAGTTCATCCAAAATGATGCCTAGAATGATGGGTGGTTATGACCCATGCTTGGATGATTATGCTAAAGCTTTTTATAATAGACCAGATGTTCAGAAGGCCCTTCATGCTAGTGATGGTCACAATCTAAAGAATTGGACTATTTGCAACAACAAGATATTCAATGATTGGGCAGATTCAAAACCATCAGTTATACCAATTTACAAGAAACTTATTTCAGCAGGACTTAGGATTTGGATTTACAGTGGAGACACAGATGGTAGAGTACCAGTTCTTTCAACTAGGTACAGCTTAAGTACTCTAGCTTTGCCTGTCACTAAACCATGGAGGCCTTGGTACCATGAAAATGAGGTTAGCGGGTGGTATGAAGAATACGAAGGACTTACATTTGCAACATTTAGAGGAGCCGGTCATGCAGTTCCCTGTTTTAAACCAGGCAACTCACTTGCATTTTTCACCTCCTTTTTACGTGGAGACTCACCTCCTTCTACAAAATAA 1479 0.3746 MDNLVVLKLKSLYTLVILLFVLCFKLSVSSRSHRHYYGGGRKLRSSSDNGSDLVTNLPGQPHVDFKHYAGYVTVNETNGRALFYWFYEAMTKPEEQPLVLWLNGGPGCSSVGYGATQEIGPFLVDNNNDGQGLKFNNFSWNKEANMLFLESPVGVGFSYSNTTSDYEQLGDDLTANDAYNFLHNWFLKFPSYRTKTFYIAGESYAGKYVPELAELIHDRNKDPSLYIDLKGILLGNPETSDAEDWMGLVDYAWSHAVISDETHKTIKTNCDFNSSDPWKNEDCDQAVDEVLKQYHEIDIYSLYTSVCFASTARSNGQTMQTSTKRSSKSSSKMMPRMMGGYDPCLDDYAKAFYNRPDVQKALHASDGHNLKNWTICNNKIFNDWADSKPSVIPIYKKLISAGLRIWIYSGDTDGRVPVLSTRYSLSTLALPVTKPWRPWYHENEVSGWYEEYEGLTFATFRGAGHAVPCFKPGNSLAFFTSFLRGDSPPSTK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03644 492 Gene3D alpha/beta hydrolase 49 309 IPR029058 -
Trre7g03644 492 FunFam Carboxypeptidase 341 487 - -
Trre7g03644 492 Pfam Serine carboxypeptidase 59 485 IPR001563 GO:0004185|GO:0006508
Trre7g03644 492 Gene3D - 391 485 - -
Trre7g03644 492 FunFam Carboxypeptidase 48 309 - -
Trre7g03644 492 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 53 472 IPR001563 GO:0004185|GO:0006508
Trre7g03644 492 FunFam Carboxypeptidase 391 485 - -
Trre7g03644 492 SUPERFAMILY alpha/beta-Hydrolases 49 486 IPR029058 -
Trre7g03644 492 Gene3D - 344 380 - -
Trre7g03644 492 ProSitePatterns Serine carboxypeptidases, serine active site. 199 206 IPR018202 GO:0004185
Trre7g03644 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 159 IPR001563 GO:0004185|GO:0006508
Trre7g03644 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 148 IPR001563 GO:0004185|GO:0006508
Trre7g03644 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 210 IPR001563 GO:0004185|GO:0006508
Trre7g03644 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03644 Trre-Chr7 43796727 43801387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03644 349 486 Calmodulin-binding Proteins AT2G22960 34.532 1.30e-16 76.3