Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03642 ATGATGCAGCCGGTTGAAGCTAAACCAAATATCTATATGAAAGTTAACTCACCTGTTACCCTCAAGTTTGAAGATATTGTGCATAAATTCAAAACTAGCAAAAGGGAAGGCTTGTTCTTCAAAAAGGAGATAAATTCTGAGGAGAAACTAATCTTGAAAGGGATCAGTGGCATTGTATTTCCAGGTGAATTGTTAGCAATTTTAGGCCCTTCAGGTAGTGGCAAATCAACTCTAATAAATGCTTTAGGAGGAAAGCTAAATAGTAGTAATATAACAAAAGGAACCATAACCTACAATGGTAAACCACTCTCAAAATCAGTGAAACAAAACTTAGGATTTGTTGCTCAACATGACATCTTCTATCCTCACTTATCAGTATACGAGACACTAGTCTTTTCCGCGCTTCTTCGTTTGCCGAATAGTCTTTCGAAACAAGAGAAAATGTCAAAAGTTAAAGAAGTTATAGATGAGCTTGATTTGAATCATTGTAAGGATACTATAATAGGAGGTTCGCTTTTAAGAGGTGTTTCGGGTGGAGAAAGGAAGAGAGTTAGTATAGGGCAAGAACTGTTGACTAATCCAAGTCTATTGCTTGTTGATGAAGCTACAACAGGTCTTGATTCAACCACAGCTAGAAAACTTGTGATGAATTTGTGTGAGTTAGCTAAAGGTGGAAGAACCGTCGTAATGACTATACATCAACCTTCTAGTAAACTATTTCACATGTTTCAGAAGATTTTACTGTTATCAGATGGTTATGGTATGTACTTTGGAAAGGGAGATTATGTTCTCGAGTACTTCTCCGGTATCGGTTATGCTCCAATGGTTACCATGAATCCTACAGATTTCTTACTTGATCTTGCAAATGGTATATATTCTGGAAATTCAGAAGAAGATACAGATAGTACAAAACAAGACTTAGTATCTGCTTTTGAGAGTAACCTTGCATTCCAAGTAAAGACTGAATTTCAAAATTCAATGGTTTTATTTCATGATGACAGTTCAAAACATGAAATATTTGATCATTATTGCACAACTTGGTGGGAGCAGTTTACTATATTACTAAGAAGGGGTTTCAAAGAAAAAAAACATGAACAATTTTCTGTCCACAAAATATGTCATGTTTTGGCATTATCATTCTCTGCAGGCCTTATCTGGTGGCATTCTAATCCTGATCATATAAAAGACAAGGTAGGACTACTTTTCTACTATGCACAATTCTGTGGATTCATACCTATGGTTCAATCCCTCTTTACATTTCCAGAAGATCGCGCAATGATAATAAAAGAAAGGTCTTCATGCATGTATCGACTCTCATCATACTTCATAGCAAGTAATGTTATTGATCTTCCAGTGCAACTTTTCATGCCAACAATTTTCATCACAATTACTTATTGGATGGGAGGACTTAAAGCCAATGCTTCAAATTTCTTTCAAACACTAAGTGTCTCTCTTTTGTATGCTTTGGTATCACAAAGTATTGGACAAGCTATTAGTGCAGTGCTGATAAAAAATCCAAGGTTGGTTGTTACAGTTGGATCAGTGGTTATGACATTACTTGTTCTAACTAATGGATACTTTGTTCAAAATATGCCAGAATTTATATCATGGATTAAGTACTTATCTCATAGCTATTATTACAATAAGCTCTTGCTAGGGTCACAATTCAAGAATGATGACATTTATTCATGTGGTCAAAATGTTACTTGCTTAGTTGGAAACTATCCTACAATTAAGCATGTTGGTCTTGATAATCAAGGTTTGTCTGTTGCTATCTTGGTGGCAATGCTTGTTGGCTATAGGCTAATTGCCTATTTTGCCCTTATGGTTGGAATGACATAG 1842 0.3545 MMQPVEAKPNIYMKVNSPVTLKFEDIVHKFKTSKREGLFFKKEINSEEKLILKGISGIVFPGELLAILGPSGSGKSTLINALGGKLNSSNITKGTITYNGKPLSKSVKQNLGFVAQHDIFYPHLSVYETLVFSALLRLPNSLSKQEKMSKVKEVIDELDLNHCKDTIIGGSLLRGVSGGERKRVSIGQELLTNPSLLLVDEATTGLDSTTARKLVMNLCELAKGGRTVVMTIHQPSSKLFHMFQKILLLSDGYGMYFGKGDYVLEYFSGIGYAPMVTMNPTDFLLDLANGIYSGNSEEDTDSTKQDLVSAFESNLAFQVKTEFQNSMVLFHDDSSKHEIFDHYCTTWWEQFTILLRRGFKEKKHEQFSVHKICHVLALSFSAGLIWWHSNPDHIKDKVGLLFYYAQFCGFIPMVQSLFTFPEDRAMIIKERSSCMYRLSSYFIASNVIDLPVQLFMPTIFITITYWMGGLKANASNFFQTLSVSLLYALVSQSIGQAISAVLIKNPRLVVTVGSVVMTLLVLTNGYFVQNMPEFISWIKYLSHSYYYNKLLLGSQFKNDDIYSCGQNVTCLVGNYPTIKHVGLDNQGLSVAILVAMLVGYRLIAYFALMVGMT 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03642 613 Gene3D - 40 269 IPR027417 -
Trre7g03642 613 SMART AAA_5 61 254 IPR003593 GO:0016887
Trre7g03642 613 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 604 - -
Trre7g03642 613 Pfam ABC-2 type transporter 349 556 IPR013525 GO:0016020|GO:0140359
Trre7g03642 613 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524|GO:0016887
Trre7g03642 613 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 21 276 IPR003439 GO:0005524
Trre7g03642 613 FunFam ABC transporter G family member 22 39 270 - -
Trre7g03642 613 Pfam ABC transporter 52 203 IPR003439 GO:0005524
Trre7g03642 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 267 IPR027417 -
Trre7g03642 613 Pfam ABC-2 type transporter 233 330 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03642 Trre-Chr7 43774283 43777270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03642 51 296 Calmodulin-binding Proteins AT2G36910 25.000 1.87e-12 68.9