Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03637 ATGGCGTATAGACGTTTCCTCTTGCAAAGAGGAAACAATCTCATAGATCGAAGATTCAACCCATCTTTCACCTATGTTCTCCACAACGATGAACCAAAACCAGATGAAACAAAATCATCTTCAACGGAAATTACTAACAGTTTTATTCAAAGAAGATCCTTTAGAAACTCTGTTAATGGATCAATAGGTTTTTTCTCATCTTCTCAACTTAGACAGAGTCTTTCTCCTTTTGCTGGATATAATTTTTGTAGAAATATGTCAACACTTGATCAGGCTGGTTCGGATAAGATTTCCGTTATGTCTGATGTAGCTGATGTTCTTAAGGATTCGACGTTGGAAGCCGCTGTATCTTCTCAGGGTCCTGTTGTTAGTGAAGTTGCTATTGCTGCTGCTGATTCTTATTTGCCTGTACAAGCCTTGCAGTATGTTATTGATGCTGTTCATTCCTACACCGGGCTAAATTGGTGGGCGTCTATAATTCTAACTACTCTCGTGATTCGAAGCGCAACTGTTCCACTCTTAATAAATCAACTCAAGGCCACTTCTAAGCTTACGCTAATGAGGCCTCGCTTGGAAGAGATAAAGGAACAGATGGAGGGGAAGACAATGGATCCCGAGGCTGTTGCTGAAGGTCAGAAGAAGATGAATAAGCTATTCAAAGAATATGGTGTGAGTCCATTTACGCCATTGAAAGGACTCTTCATTCAAGGTCCTGTCTTCATTAGTTTTTTTCTTGCGATAACAAACATGGCTGAAAAAATGCCATCATTCAAGCATGGTGGAGCTTTATGGTTTACTGATCTCTCAACTCCGGATGCCTTATACATTTTTCCAGTGATAACTGCATTGTCATTCTTAGTAGTTGTAGAGTGTAATATGCAAGAAGGAATGGAAGGAAATCCTGTGGCTGGCACCATGAAAAATTTCTCAAGGGTTCTTGCTCTTCTTTCAGTTCCTTTCACCATGAGTTTTCCAAAGGCTATATTTTGTTACTGGGTTACATCAAATTTGTTTTCACTTACGTATGGAATGGTGCTTAAAGTTCCTGGTGTTAAGAAAACTTTGGGCATTCCTGATTTACCTCCTCCAGAACCCAGCAGTTCTCCAAAAGCTCCCTTTTCTATATTACAAGCAATCAAACAAGCTGCATCAGTGGCAAAGGGTGAGAGCCCAATGCCAGTAGAATCATCAAAACAACCAAATAAAAAGTTACCTTCATCTTCTTCTGCCGTTATTAGTCAAAGGCTTAGAAGCTTAGAGAAAAAAGTTAAAGGAAGAAAGAAAAGCAAGAAGTTATGA 1299 0.3941 MAYRRFLLQRGNNLIDRRFNPSFTYVLHNDEPKPDETKSSSTEITNSFIQRRSFRNSVNGSIGFFSSSQLRQSLSPFAGYNFCRNMSTLDQAGSDKISVMSDVADVLKDSTLEAAVSSQGPVVSEVAIAAADSYLPVQALQYVIDAVHSYTGLNWWASIILTTLVIRSATVPLLINQLKATSKLTLMRPRLEEIKEQMEGKTMDPEAVAEGQKKMNKLFKEYGVSPFTPLKGLFIQGPVFISFFLAITNMAEKMPSFKHGGALWFTDLSTPDALYIFPVITALSFLVVVECNMQEGMEGNPVAGTMKNFSRVLALLSVPFTMSFPKAIFCYWVTSNLFSLTYGMVLKVPGVKKTLGIPDLPPPEPSSSPKAPFSILQAIKQAASVAKGESPMPVESSKQPNKKLPSSSSAVISQRLRSLEKKVKGRKKSKKL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03637 432 MobiDBLite consensus disorder prediction 385 413 - -
Trre7g03637 432 CDD 5TM_Oxa1-like 152 349 - -
Trre7g03637 432 PANTHER OXA1 108 421 IPR001708 GO:0016020|GO:0032977
Trre7g03637 432 MobiDBLite consensus disorder prediction 394 413 - -
Trre7g03637 432 Pfam 60Kd inner membrane protein 155 343 IPR028055 -
Trre7g03637 432 NCBIfam membrane protein insertase YidC 154 342 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03637 Trre-Chr7 43682234 43688709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03637 45 353 Chloroplast and Mitochondria Gene Families AT2G28800 24.375 1.05e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03637 K03217 - gmx:100817052 573.163