Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03627 ATGATAGCTACAAGATTGAATCAAGCAATTTACACATTATTAGTTGTTTGCAATCTCATCATTTCTGGTAGAGGAGTTGACTTCCCTTATGTAACTCGTTTGGTAAATCTCACTTATCTTCATCATGCTGTGAGACAAGGAGCAGTTTGTTTGGATGGAAGCCCGCCTGCATATCAATTTGACAAAGGATTTGGTGATGGGGTCAACAAATGGCTCATCTTTCTTGAGGGAGGAGGATGGTGTGACACAACTGAAGATTGCTTGAATAGAATCTTGCCCACTGGCATGGGTTCTTCGACCAACATGTTTCCAAAGAATTTCACGGGGATGACATCTAATGAACGATCACTTAATCCTTACTTCTACAACTGGAATAGAGTGTATGTTCATTATTGTGACGGATCTTCATTTACCGGTAACAATTTTGACCCTGTTCACAAACTTCATTATAAAGGAGCCAAGATTTTCAATGTAGTCGTAAAAGATTTACTAGCTAAAGGAATGAAGAATGCATCAAATGCACTTCTTTCGGGTTGTTCGGCGGGTGGATTAGCTGCAATCCTGAATTGTGATAAATTCCGGTCTCTCCTTTCTACCAGTACTCGTGTAAAATGTGTTTCTGATGCTGGTTACTTTCCCCACTTGAAAGATGTTTTAGGAGGATTCAGTTTTGCAAAGTACTTCGATAATATTGTCAAACTACATGGTTCTGCTAAGAATTTACCCAAGTCTTGTACATCAAAAATGAAACCAAAAAGTTTGTGCTTTCATCCCCAGTACGCGGTGCGATATGTTGAAACACCTATTTTTATCATAAATTCCGCATATGATACATATCAGATTGCAAACATTTTGGCACCAAACATAACCAATCTGCCTAAATCTTGGGAGACTTGCAGAAGCAACACGACAACATGTTTGACGCCTGATCATGTGGAAACATTGAAAGACTTTAGATTGGGATTTTTAGATGCATTGCCTAAACTAGGTAATAGCTCATTCAGAGGGATGTTCATAAGTTCTTGCCTAATTCACTGTCAATACCATCTTCAACAAACTTGGAATGGGGTTGATCCCCGTTTTCGTCTTCATAACAAGGCAATGTCGGAGGCAGTAGGGAAATGGTTTGATGGTAAGGCTGAACTTCAGAGAATCGATCGTGAAAATGATTTGCCTAGAGTGTGCTTAACTTTGTGA 1197 0.3926 MIATRLNQAIYTLLVVCNLIISGRGVDFPYVTRLVNLTYLHHAVRQGAVCLDGSPPAYQFDKGFGDGVNKWLIFLEGGGWCDTTEDCLNRILPTGMGSSTNMFPKNFTGMTSNERSLNPYFYNWNRVYVHYCDGSSFTGNNFDPVHKLHYKGAKIFNVVVKDLLAKGMKNASNALLSGCSAGGLAAILNCDKFRSLLSTSTRVKCVSDAGYFPHLKDVLGGFSFAKYFDNIVKLHGSAKNLPKSCTSKMKPKSLCFHPQYAVRYVETPIFIINSAYDTYQIANILAPNITNLPKSWETCRSNTTTCLTPDHVETLKDFRLGFLDALPKLGNSSFRGMFISSCLIHCQYHLQQTWNGVDPRFRLHNKAMSEAVGKWFDGKAELQRIDRENDLPRVCLTL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03627 398 Pfam Pectinacetylesterase 34 378 IPR004963 GO:0016787
Trre7g03627 398 PANTHER NOTUM-RELATED 12 388 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03627 Trre-Chr7 43533925 43536849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03627 4 386 Carbohydrate Esterase AT5G45280 46.770 9.47e-126 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03627 K19882 - dcr:108207537 764.607