Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03626 ATGTATTCATTCACCAAGGTTTATTTAAATAGAATGATAGCTACAAGATTGAATCAAGCAATTTACACATTATTAGTTGTTTGCAATCTCATCATTTCTGGTAGAGGAGTTGACTTCCCTTATGTAACTCGTTTGGTAAATCTCACTTATCTTCATCATGCTGTGAGACAAGGAGCAGTTTGTTTGGATGGAAGCCCGCCTGCATATCAATTTGACAAAGGATTTGGTGATGGGGTCAACAAATGGCTCATCTTTCTTGAGGGAGGAGGATGGTGTGACACAACTGAAGATTGCTTGAATAGAATCTTGCCCACTGGCATGGGTTCTTCGACCAACATGTTTCCAAAGAATTTCACGGGGATGACATCTAATGAACGATCACTTAATCCTTACTTCTACAACTGGAATAGAGTGTATGTTCATTATTGTGACGGATCTTCATTTACCGGTAACAATTTTGACCCTGTTCACAAACTTCATTATAAAGGAGCCAAGATTTTCAATGTAGTCGTAAAAGATTTACTAGCTAAAGGAATGAAGAATGCATCAAATGCACTTCTTTCGGGTTGTTCGGCGGGTGGATTAGCTGCAATCCTGAATTGTGATAAATTCCGGTCTCTCCTTTCTACCAGTACTCGTGTAAAATGTGTTTCTGATGCTGGTTACTTTCCCCACTTGAAAGATGTTTTAGGAGGATTCAGTTTTGCAAAGTACTTCGATAATATTGTCAAACTACATGGTTCTGCTAAGAATTTACCCAAGTCTTGTACATCAAAAATGAAACCAAAAAGTTTGTGCTTTCATCCCCAGTACGCGGTGCGATATGTTGAAACACCTATTTTTATCATAAATTCCGCATATGATACATATCAGATTGCAAACATTTTGGCACCAAACATAACCAATCTGCCTAAATCTTGGGAGACTTGCAGAAGCAACACGACAACATGTTTGACGCCTGATCATGTGGAAACATTGAAAGACTTTAGATTGGGATTTTTAGATGCATTGCCTAAACTAGGTAATAGCTCATTCAGAGGGATGTTCATAAGTTCTTGCCTAATTCACTGTCAATACCATCTTCAACAAACTTGGAATGGGGTTGATCCCCGTTTTCGTCTTCATAACAAGGCAATGTCGGAGGCAGTAGGGAAATGGTTTGATGGTAAGGCTGAACTTCAGAGAATCGATCGTGAAAATGATTTGCCTAGAGTGTGCTTAACTTTGTGA 1230 0.3886 MYSFTKVYLNRMIATRLNQAIYTLLVVCNLIISGRGVDFPYVTRLVNLTYLHHAVRQGAVCLDGSPPAYQFDKGFGDGVNKWLIFLEGGGWCDTTEDCLNRILPTGMGSSTNMFPKNFTGMTSNERSLNPYFYNWNRVYVHYCDGSSFTGNNFDPVHKLHYKGAKIFNVVVKDLLAKGMKNASNALLSGCSAGGLAAILNCDKFRSLLSTSTRVKCVSDAGYFPHLKDVLGGFSFAKYFDNIVKLHGSAKNLPKSCTSKMKPKSLCFHPQYAVRYVETPIFIINSAYDTYQIANILAPNITNLPKSWETCRSNTTTCLTPDHVETLKDFRLGFLDALPKLGNSSFRGMFISSCLIHCQYHLQQTWNGVDPRFRLHNKAMSEAVGKWFDGKAELQRIDRENDLPRVCLTL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03626 409 Pfam Pectinacetylesterase 45 389 IPR004963 GO:0016787
Trre7g03626 409 PANTHER NOTUM-RELATED 22 399 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03626 Trre-Chr7 43533775 43536849 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03626 15 397 Carbohydrate Esterase AT5G45280 46.770 7.20e-126 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03626 K19882 - dcr:108207537 764.607