Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03622 ATGTCCACATTTCTACAGAATTCTCTTTCACATGAGATATTCTCTTCATTCCCTATGCTTTTCTTCACTATCTTTCCACTAATCCTTTCACTTTTCTTCATCATCAAATGGTATTTCAACAATTCTGTCTCCACAAAAAACTCACCACCTTCACCTCCAAGATTACCTCTACTTGGTAATCTCCACCAACTTGGCTTATTCCCTCACCGGTCACTCCAAAATTTATCTCACAAATATGGCCCTTTAATGCTTCTTTATTTTGGGAAGGTTCCAGTACTTGTGGTTTCCTCAGCTGATGCAGCTAGTAAAGTAATGAAAATTCATGACTTGGTTTTCTCTGATAGGCCACATAGTAAAATCTTCGATATCCTTTTATATGGTTCCAAAGATGTCGCCAGTTGTGCATATGGTGAGTATTGGAGACAAGTAAGGAGTCTCAGTGTGTTACACCTTCTTAGTAGCAAGAGGGTTCGATCTTTTCGTCATGTGAGAGAGGAAGAAACTTTAAGAATGATGGAATATATTCAGGAGTGTGGTTCTTCTGCGTCTCCGATGAATTTAACTGAGTTGTGTACTACAATTACTAATGATGTAGTATGTAGGGTGGCTTTTGGAAAAAAATACCGTGAAGGTAGAGGAAAGAAATTGCATGAGGTGTTGTTGGAGTTTGAGGAGTTATTGGGTAGTATATGTATAGGAGACTATTTACCTTGGCTTGATTGGTTGGCTAAAGTTAATGGTTTTTATAGCAGGGCAGAAAAATGTGCCAAATATTTGGATGAGTTCTTAGAACAAGTGATCGAGGAGCACATTACTCGTAGGTCTGATGGAGATGTTAGTGTTGATAGTGAGAATCAGAATGATTTTGTGGATGTTTTGCTTTCTGTTCAAAAGACTAATGCTATTGGCTTCCCAATTGATAGAACTGCAATCAAGGCTTTGATACTTGATATGTTTGCTGCAGGAACAAATACTACCAACACAGTTCTAGAATGGGCAATGACAGAACTGCTAAGACACCAAACTATAATGCATAAATTGCAAGATGAGGTGAGAACTGTGGTTGGTAACAAAACTCATGTAACTGAAGAAGATTTGGTTAACATGAACTACTTGAAAGCTGTGATCAAAGAAACACTTCGCCTCCATTTACCAGTTCCCTTATTAATCCCTCGGAAATGTATGGAAGATATCAAACTAGATGGTTATGATATTGCAGCTGGAACACATGTAATTATCAATGCTTCGGCTATTGCTAGAGACCCTACAAGTTGGGAAGAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAACAGTTCAATAGATTTTAAAGGATTGGACTTTGAACTTATCCCATTTGGAGCAGGAAGGAGAGGTTGTCCCGGAGTGTTATTTGCCATTTCTGTGAATGAATTGGTGCTAGCAAACCTTGTTTACCAATTTGATTGGAAATTGCCTGATGGAGTAGCAGGGAGGGATTTGGACATGTCTGAAACTTTTGGCCTTACTCTTCATAGAAAATACCCTCTACTTGCAGTAGCTACCAAATATGACAGAAATGAATAA 1566 0.3831 MSTFLQNSLSHEIFSSFPMLFFTIFPLILSLFFIIKWYFNNSVSTKNSPPSPPRLPLLGNLHQLGLFPHRSLQNLSHKYGPLMLLYFGKVPVLVVSSADAASKVMKIHDLVFSDRPHSKIFDILLYGSKDVASCAYGEYWRQVRSLSVLHLLSSKRVRSFRHVREEETLRMMEYIQECGSSASPMNLTELCTTITNDVVCRVAFGKKYREGRGKKLHEVLLEFEELLGSICIGDYLPWLDWLAKVNGFYSRAEKCAKYLDEFLEQVIEEHITRRSDGDVSVDSENQNDFVDVLLSVQKTNAIGFPIDRTAIKALILDMFAAGTNTTNTVLEWAMTELLRHQTIMHKLQDEVRTVVGNKTHVTEEDLVNMNYLKAVIKETLRLHLPVPLLIPRKCMEDIKLDGYDIAAGTHVIINASAIARDPTSWEEPLEFKPERFMNSSIDFKGLDFELIPFGAGRRGCPGVLFAISVNELVLANLVYQFDWKLPDGVAGRDLDMSETFGLTLHRKYPLLAVATKYDRNE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03622 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Trre7g03622 521 PANTHER CYTOCHROME P450 71B11-RELATED 32 515 - -
Trre7g03622 521 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 Pfam Cytochrome P450 49 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 CDD CYP71-like 78 510 - -
Trre7g03622 521 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 FunFam Cytochrome P450 83B1 36 513 - -
Trre7g03622 521 SUPERFAMILY Cytochrome P450 49 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03622 521 Gene3D Cytochrome P450 34 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03622 Trre-Chr7 43475744 43477702 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03622 46 515 Cytochrome P450 AT3G48270 50.955 1.14e-177 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03622 - - gmx:100819183 699.893