Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03584 ATGACATCTTTAAATGTTGATTTAAAGCCAAAGGTTGGTATGTCATTTGAGAACATAAATGGGGCTTATCAATTTTGGCTTGCATATAGTGCTCGAGTCGGCTTTGGAGTTAGAAAACGTTATACAAACAAGAAAAAGAACGACGGTACTGTATCATCGTGTAGGTTTGTTTGTTCTAAGGAAGGTCTACGAAGATCAGACCAGAGAGATCCTTTAGTTCGCAGGCATAGAGCTGCGACTAGAACGGATTGCAAAGCAAGGATTTCACTTACATATAACAATGGAAAGTTTGTCATTCATGAATTTGTGGAGGACCATAACCACTCTCTACAATGTCCAGAGACAACTCATATGCTTGCATCACATAGAAAGATAACTGAAGTTCAGGCATATGAGATTGATTTGGCTGAAGACTCGGGATTAAGGCAAAAATCAACATTTCAACTTTTGAGCACACATGCAGGGCATAGAGCTAATCTTGGATTTACAGAATTAGATGTAAACAATTACATCAATGCTAAAAGAAAGAAAAGTATGGTACGAGGCGAGGCTGGATGTCTTTTGCAATATTTTCAGCGACAATTGTTAGAGAATCCATCTTTCTTCCATGCATACCAGGTGGATACAGAAGAAAAAATCACAAATGTGTTTTGGTGTGATGCAAATATGGTTTTAGATTATGGTTATTTTGGTGACGTGTTGTCATTGGACACTACCTATTGTACCAATGAATATAATAGACCACTAGCTCTATTTTCTGGTTTCAACCACTATCGGGGTTCAGTCGTTTTTGGTGCAGCACTGATGTATGATGAGACAATCGAGTCATTTAAATGGGTTTTTGATACATTCTTACAAGCACACAACAACAAAAAACCAAAGACTGTTTTTACTGATCAAGATCCAGCAATGGCTATAGAGCACTTGCTGAAGTGA 936 0.3782 MTSLNVDLKPKVGMSFENINGAYQFWLAYSARVGFGVRKRYTNKKKNDGTVSSCRFVCSKEGLRRSDQRDPLVRRHRAATRTDCKARISLTYNNGKFVIHEFVEDHNHSLQCPETTHMLASHRKITEVQAYEIDLAEDSGLRQKSTFQLLSTHAGHRANLGFTELDVNNYINAKRKKSMVRGEAGCLLQYFQRQLLENPSFFHAYQVDTEEKITNVFWCDANMVLDYGYFGDVLSLDTTYCTNEYNRPLALFSGFNHYRGSVVFGAALMYDETIESFKWVFDTFLQAHNNKKPKTVFTDQDPAMAIEHLLK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03584 311 PANTHER OS01G0519700 PROTEIN 7 305 - -
Trre7g03584 311 Pfam FAR1 DNA-binding domain 24 111 IPR004330 -
Trre7g03584 311 Pfam MULE transposase domain 233 304 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03584 Trre-Chr7 42829211 42830146 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre7g03584 FAR1 2.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03584 - - mtr:112419281 466.848