Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03566 ATGGAAAATCGTCCAGCATGTGCTGCTTGCAGACGCCAAAGAAAAAAATGCACGAGAGATTGCATTCTTGCTCCTTATTTTCCACTAAACAAGCTTCAAGAATATAAACAAGTTCTTAGAGTTTTTGGTTACAGCAACGTCACAAAAATGGTTCAAAACCTTGGGGAACAAGAAAGACAAAATGCCATCAATTCTATTAAATGGGAAGCTAAGATGTGGACTCAAGATCCAATCTCTGGTCCATTTGGGGCTTACAATGTTGCTTGTAAGACCATTACACATCTATGCAATCTCCTCCAAAAACAACAAGAAGAACAAGCCCATCAATGGAATCTCCTCCTCCTCCAACAACAAGAACAAGCCCATCAAAGGGTTTCAACTTCTGAGCCCAATAAATTTATGGGCCAGGCCCAAGTTTCATTACCTGTCAGTCATGAAGCTTTACCGGTTTCAAATAATGTCAATTGGGCATATTTTGATTCCCCTTATGTGGCTAGTAACAATGTTGTGCAAAATAATCTCAATTTTGAATATCCATATGTAAATTACTTTGGAGGTTCTTTGCAAAATGAGGAACAAAATGTATTGAAGTGTGTTCCTAGTGGTTTTGTGCAACCTTCACAATCTAATTATTTGCAAAGTATGGCAAGTAGTTCTGGCACTAATGTGACCAATGAAGAGATGGGAATGCAAAGAGATGGTAAAGGAAATTATGGTATTCACACAATGGCACAAAATAGAGTAAGGAGCCCAATTACAGAAATTCAGCATAGTTATTTTATTTATTAA 789 0.3739 MENRPACAACRRQRKKCTRDCILAPYFPLNKLQEYKQVLRVFGYSNVTKMVQNLGEQERQNAINSIKWEAKMWTQDPISGPFGAYNVACKTITHLCNLLQKQQEEQAHQWNLLLLQQQEQAHQRVSTSEPNKFMGQAQVSLPVSHEALPVSNNVNWAYFDSPYVASNNVVQNNLNFEYPYVNYFGGSLQNEEQNVLKCVPSGFVQPSQSNYLQSMASSSGTNVTNEEMGMQRDGKGNYGIHTMAQNRVRSPITEIQHSYFIY 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03566 262 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Trre7g03566 262 Pfam Lateral organ boundaries (LOB) domain 6 99 IPR004883 -
Trre7g03566 262 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03566 Trre-Chr7 42438774 42439562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03566 6 102 AS2 family AT1G06280 44.898 2.08e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Trre7g03566 LOB 4.1e-28 No_clan