Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03543 ATGACTGTTGTAAAGAATGGAGCAACTGAGATCTTGCCAACTGATGAGCCAGATGATGACTGTGTGGTTATTCCAAATCCTGAAGGCTATCAACCTGTTGAAACGATTGCCAATGAAGAAGTCGAGGACTCTGTGAATGTTTCGAATTTTGGAGGTTGTTCTCAACCTGTTGATGCATTTATTGATGAAGAGGATGGCCATGATCAATCCCCTCCAGAATTTCTCACTGGTGCCATGAGAAAATTCCCTGCATTCAATGATGATCGAAAGTTTGGTTGGAGGCTTACCATCAGTCATGCTTATGCTACTTCGACCAAGCATCAGGTTTTGCATATTCCAGCGGACACTGTTAAGCAAGTTCTTAAAAATAGGAAGAGCATTGTGATTAGAACTCCCCACAAGTTGGATGGGATCAAGTGCAACATAGTCACCTACAAAAGAAAACCAGGGAAGATGGAGATGTATCTTAGCAAGGGTTGGTTTGAGTTCATGAGAGCTAACAGTTTGAGGGAGGGAGATGTATTAGAATTTCAACTATCAGATCCGCCCGAAGCTGTGGCTGTGGACATTATTCGAGGAAGCTGTTGA 588 0.4286 MTVVKNGATEILPTDEPDDDCVVIPNPEGYQPVETIANEEVEDSVNVSNFGGCSQPVDAFIDEEDGHDQSPPEFLTGAMRKFPAFNDDRKFGWRLTISHAYATSTKHQVLHIPADTVKQVLKNRKSIVIRTPHKLDGIKCNIVTYKRKPGKMEMYLSKGWFEFMRANSLREGDVLEFQLSDPPEAVAVDIIRGSC 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03543 195 ProSiteProfiles B3 DNA-binding domain profile. 95 194 IPR003340 GO:0003677
Trre7g03543 195 Pfam B3 DNA binding domain 104 192 IPR003340 GO:0003677
Trre7g03543 195 Gene3D - 78 193 IPR015300 -
Trre7g03543 195 SUPERFAMILY DNA-binding pseudobarrel domain 102 182 IPR015300 -
Trre7g03543 195 CDD B3_DNA 95 192 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03543 Trre-Chr7 42060072 42060744 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre7g03543 B3 4e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03543 - - tpra:123886203 139.813