Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03513 ATGGGAAAGACGGATGGTGGTGGCCTGACTGCGACAGTGGCGATTTTGGATGACGGAGGCGTTGACCGGAGAACTTTTTGTTGGGATCCATTGCTGTTATTGTTGGGATCCATTGCTGTTATTTATTTGACTAAAATTGAAAATCAAGTGAGTTGTAACAAGAAGAAAATAAAGCCTCAACGGAGAAAAATCCGAAAAGAAAGCTCAAAACACCTGCACAGCTTAAGGGCTTGGAGCAATTTTATACTGAGCACAAATATAGAGTTGACAGAAAAGCAAGTATTTGTATGGTTTTGCCACCGAAGATTAAAAGATAAAAGATTGTTGAAAGAAGAAGCAAATGCTGCTGCTAATGGACGACAAGATCGTTCAAGCGGTGTCATCCATGATCGTGGCAGTGGACTCGGGCAAGATTCGTGTGGAAACTGTAAACATGGTGATTATAAGTATCTGTATCCTAAAGAGGTTGAGAGCCATGGTCTCTACAATCGGGATTTGTCAGTTGCAGATATGACCTATGGACGTAAGAACCATTTTTCTGAAAATGTTAGTGGAATGGACGATACATCATCTGAGAGTAGCTCTTTTTTGCAAGATCGGTTGTATCCTGATCCTCAAGGCCAAGATCCATATGAGACCGAGCCATCTAGATATCCAGCACATAGTAAAGCTCTTCCACCCTTAAACCCCAAGGGTACAGTTAACATGGGATATAAACCATCGGGATATTTGAAAGTGAAGGGTGAGATAGAGCATGCTGCTATAACCGCTGTTAAGAAGCAATTAGGAAGGAACTATCGGGAAGATGGTCCACTACTTGGTGTAGAATTTGATCCCCTTCCTCCAGGAGCATTTGAATGCCAAACTGGAGATCCAGTTCATGCTCGGGGAAACTCTTTTAGAGGATATGTAATGTTGGCCGGTTTAGAGAAGAGGAGGTTAAGAACTTGA 951 0.4227 MGKTDGGGLTATVAILDDGGVDRRTFCWDPLLLLLGSIAVIYLTKIENQVSCNKKKIKPQRRKIRKESSKHLHSLRAWSNFILSTNIELTEKQVFVWFCHRRLKDKRLLKEEANAAANGRQDRSSGVIHDRGSGLGQDSCGNCKHGDYKYLYPKEVESHGLYNRDLSVADMTYGRKNHFSENVSGMDDTSSESSSFLQDRLYPDPQGQDPYETEPSRYPAHSKALPPLNPKGTVNMGYKPSGYLKVKGEIEHAAITAVKKQLGRNYREDGPLLGVEFDPLPPGAFECQTGDPVHARGNSFRGYVMLAGLEKRRLRT 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03513 316 MobiDBLite consensus disorder prediction 180 233 - -
Trre7g03513 316 MobiDBLite consensus disorder prediction 180 201 - -
Trre7g03513 316 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 83 295 - -
Trre7g03513 316 Pfam Homeodomain 83 107 IPR001356 GO:0003677
Trre7g03513 316 ProSiteProfiles 'Homeobox' domain profile. 83 108 IPR001356 GO:0003677
Trre7g03513 316 Gene3D - 82 125 - -
Trre7g03513 316 CDD homeodomain 83 107 IPR001356 GO:0003677
Trre7g03513 316 SUPERFAMILY Homeodomain-like 79 113 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03513 Trre-Chr7 41725598 41729174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03513 83 294 Homeobox Transcription Factor Family AT4G03250 53.991 2.96e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Trre7g03513 Homeodomain 1.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03513 - - gmx:100803515 324.324