Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03479 ATGAATAATTTGCTTTCACAGTCAACCCTGCCATTTACCATATGCACCACGTTGTTGTTTCTCTTCATTCTTTATTGGCTACGCAGAAGCAATAATGGTGTAGCTTCAAAGACACTCCCACCACCACCAGAAGTCGGAGGTGCTTGGCCTTTAATCGGTCACCTCCACCTTTTAATGGGTTCCCAGCCACCTCACGTCATCTTGGGGAAGTTAGCCGATAAATACGGACCAATCTTCACCATACGTTTAGGTGTTCATCGAACTTTAGTTATAAGCAGTCATGAAATGGCAAAACAATGTTTCACCGTAAACGACAAAGCGTTTGCTTCCCGTCCTAAATCTATAGCTTTTGAAATTTTGGGTTATAACTTTTCGATGATAGGTTTCAGTCCCTACGGTTCCTATTGGCGTACAGTGCGTAAGATATCCACCATCCACGTACTCTCCGCAACACGAATTGATATGCTTAAACATGTTATGGAATCAGAGGTGAAGGTAGCAATGAAAAAGAGTTATGATTTTTGTGTTAAGATGAAGAATGAGGAGGGTAGTTGTGAAAGGGTAATTACGGAAATGAAAAAATGGTTTGGAGACATAGCGATAAATGTTTTGTTTAGAACAGTAGTGGGAGAACGTTTTGATGGTGAAGGGGAAAAGAACAAACGGATTCGAAAAGCATTTAGAGAGTTGTTTCATTTGTGTGGTTCGTTTGTTATATCTGATGCAATGCCATTTTTGAGATGGTTAGATTTGGATGGAAAAGAGAAAGAAATGAAGAAAACTGCTAAAGAGTTAGATGAGTTTGTTCAAGTTTGGCTTGATCAACACAAACGTAGTTGGATTTCTGGAAATGAACGTGATTTCATGGACGTGATTATCTCCACCATTGGTGATCAAGAAATAGACGGCCGTGATGCTGCTACTACTATCAAAACTACATGTCTGTCATTAATTCTAGCGGGCACAGACACAACAACATCAACATTGACTTGGGCTCTATGTTTACTTCTCAACAATCGTGAAATTCTAAATAAGGTTGTGCACGAATTAGATACACAAATTGGTAGAGAAAAGACAGTAATGGAATCCGATTTGAATAACTTAGAGTATCTTCAAGCTATTATCAAGGAAACAATGCGCTTGTGCCCAACCGTACCACTCAATGTGCCCCATGAGTCCATTGAAGATTGTACCGTTGGTGGATACCATGTACCAACTGGAACTCGTCTTCTAACTAACATTTTAAAACTTCAGCAAGATCCGCTCATATATTCTAATCCGCTAGAATTTTATCCAGAGAGATTTCTCACAACACACAAGGATGTTGATCTTAAGGGCCAACATTTTGAGTTGATTCCATTTGGTGCTGGTAGAAGAATGTGTCCGGGAATCTCATTAGGTCTTAAGCTAATTCAAATAATACTTGCTAATTTGTTGCATGGATTTGACATAGTAACTCTAGATGGAGGGTCGGTTGACATGGTTGAACAAAGTGGACTGACAAACATCAAAGCCTCTCCACTCAAGGTCATTCTCACACCACGTTTGTCAACCCATGTTTATGGTTTGAAGTAG 1575 0.3968 MNNLLSQSTLPFTICTTLLFLFILYWLRRSNNGVASKTLPPPPEVGGAWPLIGHLHLLMGSQPPHVILGKLADKYGPIFTIRLGVHRTLVISSHEMAKQCFTVNDKAFASRPKSIAFEILGYNFSMIGFSPYGSYWRTVRKISTIHVLSATRIDMLKHVMESEVKVAMKKSYDFCVKMKNEEGSCERVITEMKKWFGDIAINVLFRTVVGERFDGEGEKNKRIRKAFRELFHLCGSFVISDAMPFLRWLDLDGKEKEMKKTAKELDEFVQVWLDQHKRSWISGNERDFMDVIISTIGDQEIDGRDAATTIKTTCLSLILAGTDTTTSTLTWALCLLLNNREILNKVVHELDTQIGREKTVMESDLNNLEYLQAIIKETMRLCPTVPLNVPHESIEDCTVGGYHVPTGTRLLTNILKLQQDPLIYSNPLEFYPERFLTTHKDVDLKGQHFELIPFGAGRRMCPGISLGLKLIQIILANLLHGFDIVTLDGGSVDMVEQSGLTNIKASPLKVILTPRLSTHVYGLK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03479 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 Pfam Cytochrome P450 43 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 PANTHER CYTOCHROME P450 82C3-RELATED 18 521 - -
Trre7g03479 524 FunFam Cytochrome P450 82C4 32 513 - -
Trre7g03479 524 SUPERFAMILY Cytochrome P450 45 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 Gene3D Cytochrome P450 34 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g03479 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03479 Trre-Chr7 40904929 40908439 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03479 43 521 Cytochrome P450 AT4G31940 47.677 5.87e-166 479