Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03470 ATGGAAGGTGAGGCTAGTTCGGAGGGGGATAGTGATCGGAAAAGGGGTGGTGGTGGAGATGATAACAGCGATGAAAATAACAACAATAAGAACAACAATAATGGAAGCAATAGCAAAATTGCGGTTTCTAATGAGGGGCAAAGCAAGCCTAAGAGACAGATGAAGACACCGTTTCAGCTTGAAACCCTTGAGAAAGCTTATGCTTTGGATAATTACCCTTCGGAGCCGGTGAGGATCGAGTTGTCTGAGAAATTGGGGTTGACGGATCGGCAATTGCAGATGTGGTTTTGCCATAGGAGGTTGAAGGATAAGAAGGAATCGGCTCCCAAGAAGGGGCCGCCACCACGGAAGCCAGTGGTGGAGCCTTTGCCGGATTCTCCGGTGGATGACCTCAGAATGGTCTCTGAGCATGGTAATGGGTATGGATCAGGGTCGGGTTCAGGTTCCAGTCTGTCTACCCGGTTGGAGGGCCGGAATGCAATCCCCCTGAGTGTTGGTTATTATGAGTCTCCGCAGGTTGAAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCTCAGTTAGGTGAACCCTTGAGGGAACATGGACCCATTCTAGGAGTGGAGTTTGATACATTGCCACCAGATGCTTTTGGAGCACCTATAGTTACAGAACACCAGAAGCGACCTCGTCTTACCTATGACAGTAAAATGTATGGAAGACATGATGGTAGAACAAACAAGGCTATGGCAAGGACATCCCTTGAATATCAACATCAACCAAACCAGTCTGGCATTAAACCTGATGCTTTTGGACAGTTCGGCCAATCTCATTTACATACTCCGAAGGAGGGTCCTTCGAGAAACTCTCCACTACCTAGAATTCATGCCACCAAGGGTCATTCTTCTCGTGTTTCTCTTTTGTCTCAAAAAGACAAGAAAGTGAGTCCCTACCAATCTCCTCCTCGGGATGATGTTGTCCCTACACAGGAGTTGTACACAAACACTGCGAATGTTGGAATGAACTCCCACCAAACTGATTGCCTAACTGGTGGGTCTGAAAATCCCTATGCTTCACCCAGTGGACAAATTTTTCAAAACAATGCAACACATAACGATAGGAAACGGAAGGGTGATGATGCCAAAATTACAAGGGATGTTGAAGGCAATGAGATGAGAATCCAGAGAGAGCTCGAAAAACAAGATAACCTTAGAAGAAAGAATGAGGAGCGGATAAGGAAAGAAATGGAGAGACAAGATCGTGAAAGGAGAAAGGAAGAAGAGAGATTGATGCGTGAGAGACAACGTGAAGAGGAAAGAACAAAACGAGAGGAAAAACGTGAAATTGAACGAAGGGAAAAGTATTTGTTGAAAGAAAATTTAAAAGCCGAGAGAATGAGGCAAAAAGAAGAGCTTCGGAAAGAGAAAGAGGCAGAGAGAAGGAAAGCTGCCCTTGAGAAGGCACATGCCCGTAAAATTGCTAAGGAATCCATGGAACTTATTGAGGATGAACAACTGGAAATGATGGAGTTAGCTGCTTCAAGCAAGGGGCTTTCCTCTATTATCCGTCTTGATTTTGATACTTTGCAAAACATTGACTCATTTAGGGGTTCACTGTGTGTTTTCCCACCCGAGAATGTAAAGCTAAGAAAACCATTTGCCATCCAACCGTGGATCAACTCAGAAGAGAATGTTGGCAACCTTCTCATGGTTTGGAGGTTTTTGATTACCTTTGCTGATGTTCTGGAATTATGGCCTTTTACTCTTGATGAGTTCGTGCAAGCATTTCACGATTATGATTCAAGATTGTTAGGTGAGATACATGTTGCCATCCTTAAGGTGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTGTTACAGGATTAGGAATGAATCAGAATGGTGCTGCTAATTCTGGAGGTGGCCATCCAGAGATTGTGGAAGGGGCATATGCATGGGGCTTTGACATACGGAATTGGCATAAGCACTTAAATCAATTGACATGGCCAGAAATTTTCCGACAGCTAGCATTGTCTGCAGGATATGGACCACAGTTTAAGAAAAGAAGTATTACAAGTTCACGTGCAAATAGTAAAGATGAGGGAAGAAGCTGCGAAGATGTCATTTCTGCACTTCGTAATGGTTCAGCAGCTGGAAATGCGGTGGCAAAAATGCAGGAGAGAGGTCTATTAGGACCTCGAAGATCTAGGCATCGGTTAACTCCTGGAACAGTTAAGTTTGCAGCATTTCATGTTCTCTCGCTAGAGAGTGGTGAGGGATTGAATGTGATAGAGCTTGCCGAGAAAATTCAGAAATCTGGTCTTCGGGACCTGACAACCAGCAAGACACCTGAGGCATCAATTTCTGTTGCTTTGACAAGAGATGCCAAGCTTTTTGAAAGAGTAGCCCCATCAACTTATTGTGTACGTGCTGCATTTAGAAAGGATCCTGCTGATGCCGAGTCCATTCTTTCCGAAGCAAGAAAGAAAATTCAGATATTTGAAAACGGGTTTCTAGCTGAGGAAGATGCTGATGATGGTGAAAGAGAAGAGTCGGAAAGTGAAGTCGATGAGGATCCTGAAGTTGATGATTTGGTTAATCCTTCAAGTGTTAACAAAACATCTGAACATTGTAATGTTTTTTCATCAAGTGGAAAAGAAAATCTTGGTCATGATGCAGAACTTAAAGATGAGTTCGATAAGGATCTGCCTTGTTATCCTGACAATGGTTCTAAGAATGCTGATCGTCCGCGTGCTGTTTCTGGACAACCTGTTGCTTGTGAAAATCTAAATGCCAGAAATCTAGGTGAAGATAACATGGAAATTGATGAAAGTAAGTCTGGAGAGTCATGGATTCAAGGGCTTACTGAAGGAGAATATTCTGATCTCAGTGTAGAGGAGCGGTTAAATGCTCTTGTTGTATTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCCCTGAAGAAGCAAATGTTGGCAGAAGCAGCAATTGATAAAATTCGCATGAAAGATGATAATGTCATTAAATCAGATTTTCCTTCTATCAAGGCTGAAACACAGCTTACATGTGCTGCTGTGGAGGGCAACCAAAGCCCCTTGCTTGATACTAATAGTTGCAATAATAATAACGAGGAATCTCCCAGCAAAACAGAAAATAAGAGACTATCTCTTGTTGGACAAAACCTTTCTGAAAAGCTCTCATCAGGTCAAGATCTCTGCATAGGTCCTGATAATCCTCAGACCCTGTTATCTGCGCAATATTCAAAACGGTCACGATCTCAATTGAAATCTTATATTTCCCACCTAGCAGAGGAGATGTACATCTATAGATCCTTACCCCTTGGGCAAGACCGCAGACATAATCGATATTGGCAATTTGTTGCATCTGCTTCTTGCAATGATCCTGGCTCGGGAAGGATCTTTGTTGAATATCATGATGGCAAATGGAGGCTTATTGATTCTGAAGAGGCCTTTGACGCCCTTCTGAACTCACTGGATTCACGTGGCATCCGGGAATCACATTTGCGTCTAATGTTGCTAAAGATTGAGAATATATTTAAGGAAAATGTTCAAAAGAAAGCAAAATGTGCCAAAGTCGATAACACAGATGAAATCCGTGTTAAAAATGAAGCTGATGAAACAGATTCCAGCCCTGATAACCACACTAGATCTGACAGTCCTAGTAGTACTCTTTGTGGCTTGAGCTCTGATACTTCAGAAACTTCGTCATCCTTCAGAATTGAGCTTGGGAAAAGTGAGAGCGACAAGAAAGCTGCCTTGGGAAGGTATCAAGATTTTCAAAAATGGATATGGAAAGAATGTTATAACCCATCAATATTATGTGCAATGAAATATGGGGAAAAGAGATGCAAACCTCAGGTTGACATATGTGATACCTGTCTCGACCTTTATTGCTTGGAAGATTCCCATTGCAGTTATTGCCACCGCACTTTTCCATCAAGTGATGGATTTAATTTTTCTGAACATGCTTTTGAATGTGGGAACAAGTTACCCAAAGATATTTGTATTCTGGATTCTTCTCTTCCTCTGAGGACAAGACTGCTCAAGGCCATACTGGCTTTTATTGAGGTATCTGTTCCACCTGAAGCATTGCAATCAATTTGGACAGAAGATATTAGGAGGCTCTGGGGTGTGAAGTTGAACAGATCTTCTTCTGTAGAGGAACTTCTACAGATATTGACTCTATTTGAGAGAGCACTAAAGCGAGATTTTTTATCATCATCCTTCTCTACAACTGGGGACTTGTTGGGGACGAGCACTATGTCGGAGAGTGCTGCACATAATTCCATGGATCTTGAATCAGTTCCTGTTCTTCCATGGGTTCCGCGGACCACTTCAGCTGTGTCTCTCAGACTTTTTGAGTTTGACACCTCCATCGCTTACGTTAAGCTAGAGAAACCTGAGCTGTGTGAGGAGAAAGAAGCTAGATACATAAAGCTTCCTTCAAGATATGCTTCTGTCAAATCTACTAAAGTGGTTGAGCCGGCAGACTTGGATCATGATGAACTAATGAAAGTGAAATCTGCTCCTATTCTGCACAGCAGCAAAAAACGGGGACGAGTGAATCATGATAAAGGAAGGTCTAAAAAACAGTTTAAAAGAACGGATGATTCCAAACGAGATAATGTCCACCAAAATTTTATGGTCACTGATAATCTAAGTCAAAGAATAAAACAGCAGGGACAAGGATCACAAGGACAAGCAGGTGGACGTGGCCGTCGGACAGTCAGGAAAAGGAGAGCGGAGAAGAGGGTTGTTGAAGATTTTTTACTGGATGATAGGGCTGCCAATCATAGCTTCACTTTTGGTAGAGAACCATCAAGAATCTTGGATGAGGACTGGAATGTTGAGAAGACTGGACCCATCCATATGGAAGTTGCTGACATGAGTAGCAGCAGTGAAGAGGTTGAATATGATGACAACGTCCAGGCAGTTGAATCTGATGACAATGTCGAAGCAGTAGAGTACGGTCAAGGAAACTGGGAGATAGGTTTTAATGGTACTCCCAACAGATGGAATAGGGATTTGGTTGGAATGAGTGATGAAGAAGATGCGGAAGTTTTTGAAGATGACAATAACAATGGCATTGAAGAGAATGAAGAGGAAGAGGAAGAGGAGGAGGACGAGGAGGAGGGTTTTGAGGCAGATGTTATGAGCGAGGGTTCAGATGGTATGGCCAATAATAGAGTTGTAAATGAAGAAAGCTCAGACTCGAGTGACTCCGAAGATTCTTCTGATTAG 5277 0.4277 MEGEASSEGDSDRKRGGGGDDNSDENNNNKNNNNGSNSKIAVSNEGQSKPKRQMKTPFQLETLEKAYALDNYPSEPVRIELSEKLGLTDRQLQMWFCHRRLKDKKESAPKKGPPPRKPVVEPLPDSPVDDLRMVSEHGNGYGSGSGSGSSLSTRLEGRNAIPLSVGYYESPQVEMELRAIACVEAQLGEPLREHGPILGVEFDTLPPDAFGAPIVTEHQKRPRLTYDSKMYGRHDGRTNKAMARTSLEYQHQPNQSGIKPDAFGQFGQSHLHTPKEGPSRNSPLPRIHATKGHSSRVSLLSQKDKKVSPYQSPPRDDVVPTQELYTNTANVGMNSHQTDCLTGGSENPYASPSGQIFQNNATHNDRKRKGDDAKITRDVEGNEMRIQRELEKQDNLRRKNEERIRKEMERQDRERRKEEERLMRERQREEERTKREEKREIERREKYLLKENLKAERMRQKEELRKEKEAERRKAALEKAHARKIAKESMELIEDEQLEMMELAASSKGLSSIIRLDFDTLQNIDSFRGSLCVFPPENVKLRKPFAIQPWINSEENVGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVAILKVIIKDIEDVARTPVTGLGMNQNGAANSGGGHPEIVEGAYAWGFDIRNWHKHLNQLTWPEIFRQLALSAGYGPQFKKRSITSSRANSKDEGRSCEDVISALRNGSAAGNAVAKMQERGLLGPRRSRHRLTPGTVKFAAFHVLSLESGEGLNVIELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERVAPSTYCVRAAFRKDPADAESILSEARKKIQIFENGFLAEEDADDGEREESESEVDEDPEVDDLVNPSSVNKTSEHCNVFSSSGKENLGHDAELKDEFDKDLPCYPDNGSKNADRPRAVSGQPVACENLNARNLGEDNMEIDESKSGESWIQGLTEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMLAEAAIDKIRMKDDNVIKSDFPSIKAETQLTCAAVEGNQSPLLDTNSCNNNNEESPSKTENKRLSLVGQNLSEKLSSGQDLCIGPDNPQTLLSAQYSKRSRSQLKSYISHLAEEMYIYRSLPLGQDRRHNRYWQFVASASCNDPGSGRIFVEYHDGKWRLIDSEEAFDALLNSLDSRGIRESHLRLMLLKIENIFKENVQKKAKCAKVDNTDEIRVKNEADETDSSPDNHTRSDSPSSTLCGLSSDTSETSSSFRIELGKSESDKKAALGRYQDFQKWIWKECYNPSILCAMKYGEKRCKPQVDICDTCLDLYCLEDSHCSYCHRTFPSSDGFNFSEHAFECGNKLPKDICILDSSLPLRTRLLKAILAFIEVSVPPEALQSIWTEDIRRLWGVKLNRSSSVEELLQILTLFERALKRDFLSSSFSTTGDLLGTSTMSESAAHNSMDLESVPVLPWVPRTTSAVSLRLFEFDTSIAYVKLEKPELCEEKEARYIKLPSRYASVKSTKVVEPADLDHDELMKVKSAPILHSSKKRGRVNHDKGRSKKQFKRTDDSKRDNVHQNFMVTDNLSQRIKQQGQGSQGQAGGRGRRTVRKRRAEKRVVEDFLLDDRAANHSFTFGREPSRILDEDWNVEKTGPIHMEVADMSSSSEEVEYDDNVQAVESDDNVEAVEYGQGNWEIGFNGTPNRWNRDLVGMSDEEDAEVFEDDNNNGIEENEEEEEEEEDEEEGFEADVMSEGSDGMANNRVVNEESSDSSDSEDSSD 1758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03470 1758 MobiDBLite consensus disorder prediction 832 914 - -
Trre7g03470 1758 Pfam DDT domain 555 610 IPR018501 -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 336 375 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 1 59 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 294 308 - -
Trre7g03470 1758 CDD homeodomain 51 107 IPR001356 GO:0003677
Trre7g03470 1758 Coils Coil 1697 1728 - -
Trre7g03470 1758 Coils Coil 979 999 - -
Trre7g03470 1758 SMART testlast3 554 613 IPR018501 -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 1226 1245 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 860 879 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 1541 1556 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 407 439 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 22 55 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 1557 1581 - -
Trre7g03470 1758 Pfam HB1, ASXL, restriction endonuclease HTH domain 736 804 IPR007759 GO:0006355
Trre7g03470 1758 MobiDBLite consensus disorder prediction 103 153 - -
Trre7g03470 1758 Coils Coil 401 444 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 336 361 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 1695 1729 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 1037 1057 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 249 319 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 882 898 - -
Trre7g03470 1758 ProSiteProfiles DDT domain profile. 554 613 IPR018501 -
Trre7g03470 1758 ProSiteProfiles 'Homeobox' domain profile. 46 106 IPR001356 GO:0003677
Trre7g03470 1758 Coils Coil 450 487 - -
Trre7g03470 1758 Gene3D - 20 107 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 832 857 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 1523 1540 - -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 1 21 - -
Trre7g03470 1758 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 940 983 IPR028942 -
Trre7g03470 1758 MobiDBLite consensus disorder prediction 1212 1245 - -
Trre7g03470 1758 SUPERFAMILY Homeodomain-like 38 106 IPR009057 -
Trre7g03470 1758 SMART HOX_1 48 110 IPR001356 GO:0003677
Trre7g03470 1758 MobiDBLite consensus disorder prediction 1695 1758 - -
Trre7g03470 1758 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 29 1758 IPR044977 GO:0006357
Trre7g03470 1758 Pfam Homeodomain 49 105 IPR001356 GO:0003677
Trre7g03470 1758 MobiDBLite consensus disorder prediction 1519 1591 - -
Trre7g03470 1758 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1115 1187 IPR028941 -
Trre7g03470 1758 ProSiteProfiles HARE-type HTH domain profile. 736 805 IPR007759 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03470 Trre-Chr7 40723391 40732411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03470 43 1682 Homeobox Transcription Factor Family AT1G28420 48.453 0.0 1304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Trre7g03470 WSD 8.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03470 - - gmx:100818817 2228.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03470 7 40723391 40732411 Trre7g03470 7 40723391 40732411 ECH
Trre7g03470 7 40723391 40732411 Trre3g00514 3 3444065 3451917 PCT