Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03468 ATGGAGTCACGAGTGTTGTCACGCGCCACCACTCTCTCCTCTCTTCCTCGTCTTAACAAACTTCATCGGGAACATCTCGCCACCAATGCTTCACTTCTCTCCGTGAAATCGATCGGATCAGTTTCCGATGGCGGGAACCTTGTTTGGGGAAGACAACTTCGTCCGGAGTTGTGTTCACCGGCGCTTAAGAAAGGTGCTGTGCTTCTCCGTCCTTGTCTTGCCGCTGCCGAGGGAAAAGATTCCGCCGGGGAAGAGAAAGTGGCTCCGACCGGGTTTTTCAGTCGGTATCCGGCTCTTGTTACCGGTTTTTTCTTCTTCACTTGGTACTTTTTGAATGTGATTTTCAACATCCTCAACAAGAAGATCTACAATTATTTTCCCTATCCTTACTTCGTGTCGGTTATCCATTTATTTGTGGGAGTGGTTTACTGTTTGATAAGCTGGACCGTGGGCCTTCCTAAGCGTGCTCCAATTGATGCCAACCTGCTGAAGTTGCTGATTCCAGTAGCTGTGTGTCATGCATTAGGCCATGTGACCAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACACATACCATTAAAGCTCTTGAGCCATTCTTTAATGCTGCTGCTTCACAGTTCATACTTGGACAATCAATTCCTATCACTCTATGGCTCTCACTGGCTCCTGTTGTTCTTGGTGTGTCACTTGCATCTTTGACTGAGCTCTCATTCAACTGGCTGGGATTCATAAGTGCTATGATTTCAAACATTTCATTTACATACAGGAGTATCTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATATCTATGCCTACATTTCAATCATTGCTCTCATTGTCTGCATACCACCTGCCTTAATTCTGGAAGGGCCTACACTGTTGAAGACCGGGTTCAATGATGCAATTGCTCAAGTTGGTTTGGTCAAGTTTGTATCAGATCTCTTTTGGGTTGGTATGTTTTACCATCTCTACAACCAGGTGGCCACCAACACACTAGAGAGAGTTGCTCCTCTTACTCATGCAGTTGGCAACGTACTCAAACGTGTATTTGTTATTGGATTTTCGATAATTATCTTCGGTAACAAGATTTCCACCCAAACTGGCATAGGAACTGCCATTGCAATTGCTGGAGTAGCACTCTACTCCTTCATCAAAGCCAAGATTGAAGAAGAGAAGCGACAAGCAAAAGCAGCATAA 1212 0.4472 MESRVLSRATTLSSLPRLNKLHREHLATNASLLSVKSIGSVSDGGNLVWGRQLRPELCSPALKKGAVLLRPCLAAAEGKDSAGEEKVAPTGFFSRYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWTVGLPKRAPIDANLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVLGVSLASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALILEGPTLLKTGFNDAIAQVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTAIAIAGVALYSFIKAKIEEEKRQAKAA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03468 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 319 388 - -
Trre7g03468 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 236 - -
Trre7g03468 403 Coils Coil 386 403 - -
Trre7g03468 403 PANTHER SOLUTE CARRIER FAMILY 35 102 394 - -
Trre7g03468 403 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 99 397 IPR004696 GO:0016020|GO:0022857|GO:0055085
Trre7g03468 403 Pfam Triose-phosphate Transporter family 100 387 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03468 Trre-Chr7 40679712 40682779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03468 1 401 Antiporters AT5G46110 78.589 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03468 K15283 - gmx:732611 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03468 7 40679712 40682779 Trre7g03468 7 40679712 40682779 ECH