Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03467 ATGGCTTCTAAAAATGGCTTATACAAAGCAAGTGAACTTTTCCAAGCACAAGCTCACTTGTACAAAGTGATGTACAGCTCCCTCAATCCAATGTCTGTCAAATGGGCCATTGACCTTAAAATACTAGATATCATCAACAATCATGCCCAACCCATTACTCTTTCCGAACTTGTTTTAGCTCTTCAAGTTCCGCTATCCAAACAAACATGCGTCCAAAGACTCATGCGATTATTAGCACATATTGATCTCTTTGCAATTGTCAAAATTCAAGACAACAAAGAAGCATATGCTCTTACTCCAACATCACAACTTCTTGTATCTGGCACTGATCATTGTTTATCTTCCATGGTTCGGTTTCTAAACACTCCTATTCTCGTTGATTCCTACAATCATTTGGGGAAATGGACTTCGGGGGAGGATCTCACTGTTGTTGAGACTGCATTAGGCCCTGAAAATTATTGGGATTTCATTCATCAAAATTCTGCATACTTAAATACTTTTAATGAGGCTATGGAAAGTGATTATCATGTTGCGAGATTGGCTTTGAGAGATTGTATGTCTATTTTTGAAGGGATTGGTTCGTTGGTCGATGTTGGTGGTGGAACTGGAAACACAGCTAAGATTATATGCGAGACATTTCCGGAGCTCAAGTACATTGTCTTGGACCTTCCACATGTTGTTTTGGGTTTTGCAGGAAGCAATAACTTGAGTTTTGTCGGCGGTATCTATCCCTCAAGCCGATGCTGTTTTGCTCAAGGTTTCAATTTGGTCTCTTCCGTCAGTTTTTGCACATGTGACAGACGGTTTGCACACGTGGATTGA 822 0.4027 MASKNGLYKASELFQAQAHLYKVMYSSLNPMSVKWAIDLKILDIINNHAQPITLSELVLALQVPLSKQTCVQRLMRLLAHIDLFAIVKIQDNKEAYALTPTSQLLVSGTDHCLSSMVRFLNTPILVDSYNHLGKWTSGEDLTVVETALGPENYWDFIHQNSAYLNTFNEAMESDYHVARLALRDCMSIFEGIGSLVDVGGGTGNTAKIICETFPELKYIVLDLPHVVLGFAGSNNLSFVGGIYPSSRCCFAQGFNLVSSVSFCTCDRRFAHVD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03467 273 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 273 IPR016461 GO:0008168
Trre7g03467 273 Gene3D Vaccinia Virus protein VP39 107 245 IPR029063 -
Trre7g03467 273 Gene3D - 2 105 IPR036388 -
Trre7g03467 273 FunFam Coniferyl alcohol 9-O-methyltransferase 3 105 - -
Trre7g03467 273 PANTHER O-METHYLTRANSFERASE 12 241 IPR016461 GO:0008168
Trre7g03467 273 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Trre7g03467 273 Pfam O-methyltransferase domain 143 227 IPR001077 GO:0008171
Trre7g03467 273 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 241 IPR029063 -
Trre7g03467 273 SUPERFAMILY "Winged helix" DNA-binding domain 11 108 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03467 Trre-Chr7 40667287 40669081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03467 26 241 Monolignol Biosynthesis Gene Families AT5G54160 26.339 3.41e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03467 K22588 - gmx:100818947 260.381