Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03454 ATGCACTTCAATCATACACAACAAGTATTTGCTAGCACAAGAGCTAGCGAAGGTGTGAAAAAAGAGATCATGACATGGTGCAATGACTCAAATGATCAAGATAGAGGCATTGAAGTAATCACATCCACCATTATTCCTAGAACAAGCAATGAAACTACTCTTGTTCCTCATGATGCCACAAAACAACCCCAAATTCCAACCTTAACTTGCCCCTCATGTGGCCATAACTTTGAAACCAAAGATAAGGGTGGAAAAAATGAATTGCTGGGGTTACCAGCTGGAATGAAATTTGATCCAAATGATCAAGAGATACTACAACACTTGGAAGCAAAAGTTGTGTTTGATGTGACCAAACTTCATCCTCTCATTGATGAGTTCATACCAACGCTTGATGGAGAGGATGGAATCTGTTGTACACATCCAGAAAAGCTACCAGGTGTAAGAAAAGATGGACAGATCAAACACTTCTTTCACAGGCCATCTAAAGCATACACAACTGGAACAAGAAAAAGAAGAAAGGTTCATACTGGTGTTGATGGAGGTGAAACAAGATGGCACAAAACAGGGAAAACAAGACCAGTTTTCATTGGTGGTGTTGTGAAAGGTTTCAAAAAGATTCTAGTCCTCTACACTAACTATGGAAGGCAAAGGAAACCAGAGAAGACTAATTGGGTGATGCATCAATACCATCTTGGTAATAGTGAAGAAGAAAAAGATGGTGAATTAGTTGTTTCAAAAGTTTTCTACCAAACACAACCTAGACAATGTGGTGGTAATAATAATGGAATTATAATAAGGGAAAATTATGATGAAAATAGATTGATGAATGCTGAAGGAAATGTCCAAGATGATGATAATGAAGCTCTTCCTCCTCCTCCTATGGATTACTACAATTCTCATTTCATTAATTATGAACATGTTGTTGGTCATAATTTGGAAAGCTCATCAATGTCTCAATTTATTCCAAACATGGTTATGCAAGGTGATAACTCTTCCTTTATTGGATTAGCAATGGATGCAAACAAAGCAAGGTTGGACAGAAATTAG 1047 0.3734 MHFNHTQQVFASTRASEGVKKEIMTWCNDSNDQDRGIEVITSTIIPRTSNETTLVPHDATKQPQIPTLTCPSCGHNFETKDKGGKNELLGLPAGMKFDPNDQEILQHLEAKVVFDVTKLHPLIDEFIPTLDGEDGICCTHPEKLPGVRKDGQIKHFFHRPSKAYTTGTRKRRKVHTGVDGGETRWHKTGKTRPVFIGGVVKGFKKILVLYTNYGRQRKPEKTNWVMHQYHLGNSEEEKDGELVVSKVFYQTQPRQCGGNNNGIIIRENYDENRLMNAEGNVQDDDNEALPPPPMDYYNSHFINYEHVVGHNLESSSMSQFIPNMVMQGDNSSFIGLAMDANKARLDRN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03454 348 ProSiteProfiles NAC domain profile. 91 250 IPR003441 GO:0003677|GO:0006355
Trre7g03454 348 FunFam NAC domain-containing protein 73 100 254 - -
Trre7g03454 348 Gene3D NAC domain 100 254 IPR036093 GO:0003677|GO:0006355
Trre7g03454 348 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 45 267 IPR044799 GO:0003700
Trre7g03454 348 SUPERFAMILY NAC domain 88 250 IPR036093 GO:0003677|GO:0006355
Trre7g03454 348 Pfam No apical meristem (NAM) protein 92 231 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03454 Trre-Chr7 40279255 40283106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03454 24 259 NAC Transcription Factor Family AT4G28500 69.198 6.17e-115 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre7g03454 NAM 4.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03454 - - tpra:123916172 610.527