Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03432 ATGGCATCAAGTACCAGTTCGGACGAAACCGATCCTGACTATCGTGAATACTTAGCAAATCATCATGTTGATGAAGATGATGCTATTCCTTTTTGGGAATATCAAATTGGGGAAAAATTATCAAACTATTTGGATATTCCTGAAATGTATGGTAGCTTATTTGTGGATCCAAATCAAAATGAAATCATTCTTATTGACAATGAAAGCAATCAAAATTATTCCTGCAAGTCACACATTTCAAAAACAAATCCAAACAAAATATACATCAGCAAAGGTTGGAGAAAATATGTTAACGATAACAATTTAAAACCATATGATCAGTTAATGTTAGTTTTAAGCAAACCTCCTACATCTGTTCAAGTTTCCATTTTAGACAGGAATTAA 384 0.3177 MASSTSSDETDPDYREYLANHHVDEDDAIPFWEYQIGEKLSNYLDIPEMYGSLFVDPNQNEIILIDNESNQNYSCKSHISKTNPNKIYISKGWRKYVNDNNLKPYDQLMLVLSKPPTSVQVSILDRN 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03432 127 SUPERFAMILY DNA-binding pseudobarrel domain 33 126 IPR015300 -
Trre7g03432 127 Gene3D - 21 127 IPR015300 -
Trre7g03432 127 ProSiteProfiles B3 DNA-binding domain profile. 44 127 IPR003340 GO:0003677
Trre7g03432 127 Pfam B3 DNA binding domain 44 126 IPR003340 GO:0003677
Trre7g03432 127 CDD B3_DNA 41 125 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03432 Trre-Chr7 40145217 40145805 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre7g03432 B3 7.5e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03432 - K17572 csv:105435899 38.1206