Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03428 ATGGCTTTGAGTACAAACGGTTCTGAAGGAAGTGAACTGTATCATGCTCAAATCCATTTGTACAAACATGTATACAATTTTGTAAGTTCCATGGCACTCAAATCTGCTATGGAACTTGGCATAGCTGATGCAATCCATAACCATGGAAAACCAATAACTCTTTCTGAATTAGCTTCATCTTTGAAACTTCACCCTTCAAAAGTTAACATCTTATATAGATTTTTGCGCTTGTTAACACACAATGGTTTCTTTGCAAAAACAACAGTTAAAGGTGAAAAAGAAGAAGAAGAAGAAGAAATAGCTTATTCTCTTACACCATCTTCAAAGCTTCTTGTAAGTGGTAAACCAACATGTTTATCAGCAATTGTTAAAGGAGCACTTCATCCAAGTTCTTTAGATATGTGGAGTGCTTCAAAGAAATGGTTCAATGAAGAAAAGGAACAAACACTTTATGAATGTGCAACAGGGGAGAGTTTTTGGGATTTTCTTAATAAAGATTCTGAATCTGATACTTTGAGTATGTTTCAAGATGCTATGGCTGCTGATTCTAGAATGTTTAAGCTTGCTCTTCAAGAGAATAAGCATGTTTTTGAGGGTTTGGAGTCTCTTGTTGATGTGGCTGGTGGAACTGGTGGTGTCACAAAACTCATTCATGAAGCTTTTCCTAACATTAAATGTACTGTTTTTGATCAACCACAGGTTGTTGGTAACTTAACTGGTAATGAAAATTTGAACTTTGTTGGTGGTGATATGTTCAAATCTATCCCTCCTGCAGATGCTGTTTTACTCAAGTGGGTTCTTCATGATTGGAATGATGAACAATCCTTAAAGATATTGAAGAACAGCAAAGAAGCTATTTCACACAAAGGGAAAGATGGAAAAGTGATTATCATCGACATATCAATTGATGAAACAAGTGATGACCGTGGATTAACTGAGTTGCAATTGGACTATGACTTGGTGATGCTTACAATGTTTCTCGGTAAAGAAAGAACAAAGAAAGAATGGGAGAAACTCATTAACGATGCAGGTTTCAGCAGCTACAAGATATCTCCTATATCTGGCTTCAAGTCTCTCATTGAAGTTTATCCTTAA 1095 0.3589 MALSTNGSEGSELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPITLSELASSLKLHPSKVNILYRFLRLLTHNGFFAKTTVKGEKEEEEEEIAYSLTPSSKLLVSGKPTCLSAIVKGALHPSSLDMWSASKKWFNEEKEQTLYECATGESFWDFLNKDSESDTLSMFQDAMAADSRMFKLALQENKHVFEGLESLVDVAGGTGGVTKLIHEAFPNIKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPPADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKKEWEKLINDAGFSSYKISPISGFKSLIEVYP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03428 364 Pfam O-methyltransferase domain 135 346 IPR001077 GO:0008171
Trre7g03428 364 Gene3D - 6 111 IPR036388 -
Trre7g03428 364 FunFam O-methyltransferase ZRP4 114 364 - -
Trre7g03428 364 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Trre7g03428 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 363 IPR029063 -
Trre7g03428 364 SUPERFAMILY "Winged helix" DNA-binding domain 11 115 IPR036390 -
Trre7g03428 364 PANTHER O-METHYLTRANSFERASE 16 349 IPR016461 GO:0008168
Trre7g03428 364 FunFam Coniferyl alcohol 9-O-methyltransferase 4 111 - -
Trre7g03428 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 364 IPR016461 GO:0008168
Trre7g03428 364 Gene3D Vaccinia Virus protein VP39 112 364 IPR029063 -
Trre7g03428 364 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03428 Trre-Chr7 40050002 40051606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03428 28 350 Monolignol Biosynthesis Gene Families AT5G54160 33.636 3.92e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03428 K22588 - ag:AAY18581 646.736