Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03418 ATGGAAAGTGATTCTCATGTGATGAGATTGGCACTGAGTGATTGCAAGCCTGTTTTTGAAGGCTTGGGTTCTCTGGTTGATGTTGGAGGTGGAACTGGAAACACAGCTAAAATCATCTGTGAGATATTTCCTGTGTTAAAATGCACAGTGTTGGATCTTCCGCGGGTGGTGGCAGGCTTACCAGGAAATGAAAAATTGAGTTTTGTTGGTGGAAACATGTTCGAATCTATCCCTCAAGCTGATGCAATCTTACTTAAGTGGATTTTGCATGACTGGAATGACGATGACTGTGTAAAGATACTCCAAAATTGTAAAGAAGAAGTTTTAAGAAAAGGCAAAGGAGGAAAAGTGGTTATAATAGATATTGTGTTGTGA 375 0.3973 MESDSHVMRLALSDCKPVFEGLGSLVDVGGGTGNTAKIICEIFPVLKCTVLDLPRVVAGLPGNEKLSFVGGNMFESIPQADAILLKWILHDWNDDDCVKILQNCKEEVLRKGKGGKVVIIDIVL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03418 124 PANTHER O-METHYLTRANSFERASE 1 124 IPR016461 GO:0008168
Trre7g03418 124 Pfam O-methyltransferase domain 7 124 IPR001077 GO:0008171
Trre7g03418 124 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 124 IPR016461 GO:0008168
Trre7g03418 124 Gene3D Vaccinia Virus protein VP39 1 124 IPR029063 -
Trre7g03418 124 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 123 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03418 Trre-Chr7 39918765 39919304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03418 19 113 Monolignol Biosynthesis Gene Families AT5G54160 52.632 1.23e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03418 K22588 - qsu:112022291 178.333