Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03406 ATGGGAAAAAGAAAGGCAAAAACAAAACCACCTCCAAAGAAAAGAATGGATAAGCTTGACACTGTTTTTAGCTGTCCTTTCTGCAACCATGGCTCTAGTGTCGAGTGCCGCATTGATATGAAGAACTTGATAGGGGAAGCTTCTTGCGGAATATGTCAAGAGAGCTTTAGCACTTCCATCACAGCTTTATCTGAGGCAATAGACATATACAGTGAATGGATTGATGAATGTGAACGGGTGAACACCGTAGAAGATGATGGTGCTTAG 267 0.4195 MGKRKAKTKPPPKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCGICQESFSTSITALSEAIDIYSEWIDECERVNTVEDDGA 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03406 88 Gene3D - 16 82 IPR038567 -
Trre7g03406 88 PANTHER UNCHARACTERIZED 1 85 IPR007808 -
Trre7g03406 88 SUPERFAMILY Zinc beta-ribbon 1 81 - -
Trre7g03406 88 FunFam Transcription elongation factor 1 homolog 15 82 - -
Trre7g03406 88 Pfam Transcription elongation factor Elf1 like 2 78 IPR007808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03406 Trre-Chr7 39809731 39811156 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre7g03406 Elf1 4.3e-31 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03406 K25829 - qsu:112020125 171.014