Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03380 ATGTATGAAGCAATAAGTTATTTCCAACAACTAATCAATGTTGTTGATTACTGCCATAGTAGAGGCGTGTATCACCAAGATTTGGAGCCAGAGAATCTTCTTTTGGACGTAAATGGTGTTCTTAAAGTACATATTCACAGCTTGAAGATAAAGATTCCGGAAATCTTGGAAGATGAATGGGTCAAAAAAGGATACAAGCCGACATCTTTTACCGAGGAAGACGGTATTAATGTAGATGATGTTGCTGCTACTTTCAATGATTCTAAGGAAAATCTCGTGACAGAGATAAAAGAAAAGCCAGTGTCGATGAATGCTTTTGAGCTTATTTCTAGATCACAAAGTTTCAATCTTGACAATTTGTTTGAGAATCAAAAGATGAAGCTGCAAGGTGATAAAAGTGGTAGGAAGGGTCAGCTTTCAGTGGCTACCGAGTTTTGGGTGGTTTATTGGAGCTGTTTGTTGCCTGTTACCTACTAG 477 0.3795 MYEAISYFQQLINVVDYCHSRGVYHQDLEPENLLLDVNGVLKVHIHSLKIKIPEILEDEWVKKGYKPTSFTEEDGINVDDVAATFNDSKENLVTEIKEKPVSMNAFELISRSQSFNLDNLFENQKMKLQGDKSGRKGQLSVATEFWVVYWSCLLPVTY 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03380 158 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03380 158 Gene3D Transferase(Phosphotransferase) domain 1 1 44 - -
Trre7g03380 158 ProSiteProfiles NAF domain profile. 98 122 IPR018451 GO:0007165
Trre7g03380 158 SUPERFAMILY Protein kinase-like (PK-like) 3 43 IPR011009 -
Trre7g03380 158 Pfam NAF domain 100 124 IPR004041 GO:0007165
Trre7g03380 158 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 44 - -
Trre7g03380 158 Gene3D Kinase associated domain 1, KA1 97 126 - -
Trre7g03380 158 Pfam Protein kinase domain 3 43 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03380 Trre-Chr7 39114612 39116287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03380 3 58 CBL-interacting serine-threonine protein kinases AT1G01140 66.071 4.49e-19 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trre7g03380 NAF 9e-09 CL0573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03380 - - gmx:100794136 151.754