Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03359 ATGATATTGGTAAAATATGTTTTTGGGTGTGATTTGGATGCTGTAGATGAGTACATTCCTGACCCTGTTCGCCAGCTTGACAAGCCTTTCTTGATGCCCATTGAAGATGTATTCTCAATTCAGGGACGAGGAACAGTTGCTACTGGTCGTGTTGAACAAGGAATCATCAAAGTTGGTGATGAAGTTGAGGTTTTGGGTCTGATGCAGGGTGGTCCTCTGAAAACAACAGTTACAGGAGTTGAGATGTTCAAGAAGATTTTGGATCAAGGACAAGCCGGTGATAATGTTGGTCTTCTTCTCCGTGGTCTAAAACGTGAGGACATTCAACGTGGTAAGGTCATTGCTAAGCCTGGTTCTGTAAAAACATCCAAGAAATTTGAGGCAGAGATATATGTACTCACAAAGGATGAGGGTGGGCGACACACTGCTTTCTTCTCCAACTATAGACCTCAGTTTTACTTGAGGACTGCTGATATCACTGGAAAAGTAGAGTTGCCTGAAAATGTTAAAATGGTTATGCCTGGAGACAATTGGTCTAACATAGGATCACCGTTTGAAGTACGACGCTCTTCTGAGTCTAGTCATAATGTTGAGGGTGATCAAGCAACTCCAGACGATTAA 621 0.4251 MILVKYVFGCDLDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGIIKVGDEVEVLGLMQGGPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGKVIAKPGSVKTSKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKVELPENVKMVMPGDNWSNIGSPFEVRRSSESSHNVEGDQATPDD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03359 206 MobiDBLite consensus disorder prediction 186 206 - -
Trre7g03359 206 CDD EFTU_II 30 118 IPR033720 -
Trre7g03359 206 Gene3D Translation factors 5 117 - -
Trre7g03359 206 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 124 178 IPR009001 -
Trre7g03359 206 PANTHER ELONGATION FACTOR TU-RELATED 12 177 - -
Trre7g03359 206 Gene3D Translation factors 121 183 - -
Trre7g03359 206 FunFam Elongation factor Tu 25 155 - -
Trre7g03359 206 Pfam Elongation factor Tu C-terminal domain 119 178 IPR004160 -
Trre7g03359 206 Pfam Elongation factor Tu domain 2 44 114 IPR004161 GO:0005525
Trre7g03359 206 MobiDBLite consensus disorder prediction 191 206 - -
Trre7g03359 206 SUPERFAMILY Translation proteins 24 120 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03359 Trre-Chr7 38019251 38021333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03359 12 162 Eukaryotic Initiation Factors Gene Family AT5G60390 34.416 2.43e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03359 K02358 - gmx:100791600 327.791