Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03331 ATGGTAAAAGGATCTGGACACGTTAGTGACAGAGAGCCGGTTTTTGATAATCCTTCCAAAGTTGAACCAAAACGACCTCATCAATGGGTAATGGATGCTACCGAAGGGGATTTTTTGCCAAATAAGAAGCAAGCAATAGAAGATGCAAATGAAAGATCTAGTTCAGGATTTTCTAATGTAAATTTTACTACATGGGAGAACAATCACAATTTTCATTCAGTCCCAAGCCAATTTATGGATAGATTATTTGGGTCTGAAACTAGGCCTGTCAATTTCACTGAAAAAAATACTTATGTTTCGGGCGATGATTCTAATGTCAGATCAAAGATGATCAACAATCATTATGTACATGATGCCTCTTTTGGCTTGTCTATATCTCATCCTGCTGCAGATTCTGAAGCATGTATGAATTTTGGTGGAATCAAGAAAGTCAAAGTAAATCAGGTTAAGGATTCCGGTGATGTGCAAGCTCCAGAGGAACATAATTTTGATAGGCAGAGTAAGGGTGGTCTACATCAAACCTGTAATGGGGAAGTTGAGACAAGATCCGGATCAATAGGGCAAGCCTTTGACAAGGATGGCAATGTCACTTACATGGGACTTGCCTATGGTAGTGGGGATGCCCATGTCAGATCATTTGGTACCCCCTTTGGCAAAGTAGATAACACAGTCCTATCAATTGGTGAATCCTATAATAAAGAGGAACCAAGTATACTCTCTTTTGGTGGGTTCCCAGATGAACGGGGCATTATCTCTGGGGGCAGGGCTGCTGCAGACTATGACCAATTATATAATCAACCATCGATTCACGTGTCAACAACAGCTCATGAGAAAGAGTTTGATGCATCAAATTCCAATGCAGCTGCAAGTACTCCTTTGGTGGCAACAAAAAAACCTGAATCTGTGTCCAAAAATAAACAAGATATAAAATCAACAAGAAAAGAATCTCCAAACACCTTCCCTACTAATGTCAGGAGCTTGATATCTACTGGTATGCTTGATGGTGTTCCTGTGAAGTATGTCTCAGTGTCGCGGGAGGAACTTCGTGGAATTATAAAAGGCTCTACCTATCTTTGTGGGTGTCAGTCATGTAACTATTCTAAGGGTCTGAATGCTTTTGAATTTGAAAAGCATGCCGGTTGCAAATCGAAGCATCCAAACAATCACATTTATTTTGAGAATGGGAAGACCATTTATCAAGTAGTACAGGAATTGAGGAGTACCCCTGAAAATTCATTGTTTGACACAATCCAAACTATTTTTGGTGCACCAATAAATCAGAAAGCATTTCGAATTTGGAAAGAATCATTTCAAGCAGCAACACGCGAGCTTCAGCGTATTTATGGAAAGGAAGGACGCAACATCTAA 1368 0.3991 MVKGSGHVSDREPVFDNPSKVEPKRPHQWVMDATEGDFLPNKKQAIEDANERSSSGFSNVNFTTWENNHNFHSVPSQFMDRLFGSETRPVNFTEKNTYVSGDDSNVRSKMINNHYVHDASFGLSISHPAADSEACMNFGGIKKVKVNQVKDSGDVQAPEEHNFDRQSKGGLHQTCNGEVETRSGSIGQAFDKDGNVTYMGLAYGSGDAHVRSFGTPFGKVDNTVLSIGESYNKEEPSILSFGGFPDERGIISGGRAAADYDQLYNQPSIHVSTTAHEKEFDASNSNAAASTPLVATKKPESVSKNKQDIKSTRKESPNTFPTNVRSLISTGMLDGVPVKYVSVSREELRGIIKGSTYLCGCQSCNYSKGLNAFEFEKHAGCKSKHPNNHIYFENGKTIYQVVQELRSTPENSLFDTIQTIFGAPINQKAFRIWKESFQAATRELQRIYGKEGRNI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03331 455 MobiDBLite consensus disorder prediction 281 321 - -
Trre7g03331 455 Pfam Tify domain binding domain 350 405 IPR032308 -
Trre7g03331 455 PANTHER AUTOIMMUNE REGULATOR 12 408 - -
Trre7g03331 455 MobiDBLite consensus disorder prediction 281 300 - -
Trre7g03331 455 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03331 Trre-Chr7 33115443 33117114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03331 270 438 PHD Transcription Factor Family AT3G53680 43.182 1.25e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03331 - - tpra:123918512 853.203