LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre7g03296	ATGGCGAAGACACTTATTTCATCTCCATCATTCCTCGGAACGCCACTTCCTTCACTTCATCGTAAATTCTCCCCTAATCGTACTAGATTATTCACCAAAGTTCATTTCAGTTTCCATGAACTTCCTCCAATTCAATCCATAAATCATTCCATTGACTTGTCCGGTGTCTTCGCCAGAGCTGAAGGACTTCTTTATACGCTCGCTGACGCCACCGTTGCGGCCGATGCTGCGGTTTCAACTGATGTTACCACCGTGCAGAAGAACGGAGGTTGGTTCGGCTTCATTTCCGATGCCATGGAGTTTGTTCTCAAGGTGTTAAAGGATGGTTTGTCTGCCGTGCATGTGCCTTACTCATATGGATTTGCTATCATATTGCTCACCGTTATTGTTAAGGCTGCTACACTTCCCTTGACAAAGCAACAGGTTGAATCAACACTAGCTATGCAAAACCTTCAACCTAAAATTAAGGCCATTCAAGAAAGATATGCCGGCAATCAGGAAAGAATACAACTTGAGACTTCAAGGCTATATACCCAGGCTGGGGTTAACCCATTGGCAGGTTGTTTACCAACATTGGCCACTATTCCAGTCTGGATTGGTCTATACCAAGCTCTATCTAATGTGGCAAACGAGGGACTGTTAACAGAAGGTTTCTTATGGATCCCTTCTCTGGGTGGTCCCACTAGTATTGCTGCTAGACAAAGTGGATCCGGAATTTCTTGGCTTTTTCCGTTTGTGGATGGTCATCCACCTTTGGGTTGGCAAGATACTGCAGCATATCTTGTTTTACCTATTCTTCTTATTGTTTCTCAATATGTTTCAATGGAAATCATGAAACCACCTCAGACAAATGATCCTACTCAAAAGAATACACTTCTTATTTTCAAGTTTCTGCCACTCATGATCGGCTACTTCTCACTATCTGTGCCATCAGGACTAACAATTTACTGGTTTACAAATAATGTCCTGAGCACAGCTCAGCAAGTATGGTTGCGCAAATTAGGAGGTGCAAAGCCTGCTGTTAATGAAAATGCTGGTGGAATTATTACGGCAGGACAAGCTAAGAGATTAGCTTCTAAGCCAGAAAGGGGTGGTGAAAGGTTTGCACAGTTAAAAGAAGAGGAGAAGAAGAAAAAGTTAAACAAGGCACTGCCAGTGGAGGAAGTTCAGCCTCTGGCTTCTGCTTCTGTTTCTGATGATGGCTCAGATGTAAAAAATGACAAGGAACAAGAAGTTACAGAAGATGCGTATGCTTCTAAAGTTAGCCAAGAGGTTAAAAGTTTTTCTAGGGAAAGAAGAAGTAAGCGTTCAAAGCGAAAGCCTGTTGTATGA	1332	0.4272	MAKTLISSPSFLGTPLPSLHRKFSPNRTRLFTKVHFSFHELPPIQSINHSIDLSGVFARAEGLLYTLADATVAADAAVSTDVTTVQKNGGWFGFISDAMEFVLKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWQDTAAYLVLPILLIVSQYVSMEIMKPPQTNDPTQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKLGGAKPAVNENAGGIITAGQAKRLASKPERGGERFAQLKEEEKKKKLNKALPVEEVQPLASASVSDDGSDVKNDKEQEVTEDAYASKVSQEVKSFSRERRSKRSKRKPVV	443

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre7g03296	443	PANTHER	OXA1	69	378	IPR001708	GO:0016020\|GO:0032977
	Trre7g03296	443	CDD	5TM_YidC_Alb3	120	333	IPR047196	-
	Trre7g03296	443	Pfam	60Kd inner membrane protein	119	333	IPR028055	-
	Trre7g03296	443	MobiDBLite	consensus disorder prediction	379	443	-	-
	Trre7g03296	443	MobiDBLite	consensus disorder prediction	401	415	-	-
	Trre7g03296	443	NCBIfam	membrane protein insertase YidC	118	332	IPR028055	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre7g03296	Trre-Chr7	31953412	31959351	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre7g03296	23	389	Chloroplast and Mitochondria Gene Families	AT2G28800	70.081	0.0	530

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre7g03296	K03217		-	gmx:100817173	664.07

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Trre7g03296	7	31953412	31959351	Trre7g03296	7	31953412	31959351	ECH