Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03288 ATGGAAGTTCCTGATGGAAATGGAGAGCATATTGTTGATGAGAATGAAGAGGATACTCTCAATGAGATTGCCGGAAATGATTCATGTCCGGTTGATTTAGAGGCCATTAATGTTATTCAAGAACCATACATTGGAATGGAATTTGATTCCCAAGAAAATGCTTATTCATTCTACACACAGTATGCTAAGTGTACTGGGTTTGGGATATCAATTAAAAACAGTCGCCGTTCAAAGGTTTCTAGAGAGTTTATTGACGCGAATTATGCTTGCACAAGATACGGGGAGAAACGAGAATCCACGGCACAAAATCCGCGTCCATGTTTGAAGAAGGCTATTGAGTTGATCCACGAAGGATCACTAAGCTTTGAGAGTTCCAATGTTGCATTTCATGCACTTGAAGAGACCTTGAAACAATGTGTAACTATTAATAAATCTTTGAAAATCGGCAAGGAAAAAGTTGGTCAAAATAGTTCACATGAGAAATCACTGCGTGATCCTCGACCATCAAAAACAAAAGGGGCTCCTACAAAAAGAATGAAGAGTGGGATAGAAAAAGGTCATAAGAGAACATCTAGTGCTAAAGTAAAAAAGTCTGATATTGTTCAAAGAGAAGCAATAAACAACTCAAATGTCCTCAATGATGAAGTGCCTTTTCCATCAACAAGAATGGAAAATCAGCAGGGTTCAAGGAATTAA 696 0.3793 MEVPDGNGEHIVDENEEDTLNEIAGNDSCPVDLEAINVIQEPYIGMEFDSQENAYSFYTQYAKCTGFGISIKNSRRSKVSREFIDANYACTRYGEKRESTAQNPRPCLKKAIELIHEGSLSFESSNVAFHALEETLKQCVTINKSLKIGKEKVGQNSSHEKSLRDPRPSKTKGAPTKRMKSGIEKGHKRTSSAKVKKSDIVQREAINNSNVLNDEVPFPSTRMENQQGSRN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03288 231 Pfam FAR1 DNA-binding domain 56 103 IPR004330 -
Trre7g03288 231 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 106 - -
Trre7g03288 231 MobiDBLite consensus disorder prediction 202 231 - -
Trre7g03288 231 MobiDBLite consensus disorder prediction 151 231 - -
Trre7g03288 231 MobiDBLite consensus disorder prediction 153 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03288 Trre-Chr7 31665904 31668293 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre7g03288 FAR1 1.8e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03288 - - mtr:120578282 174.481