Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03287 ATGGAAGTTCCTGATGGAAATGGAGAGCATATTGTTGATGAGAATGAAGAGGATACTCTCAATGAGATTGCCGGAAATGATTCATGTCCGGTTGATTTAGAGGCCATTAATGTTATTCAAGAACCATACATTGGAATGGAATTTGATTCCCAAGAAAATGCTTATTCATTCTACACACAGTATGCTAAGTGTACTGGGTTTGGGATATCAATTAAAAACAGTCGCCGTTCAAAGGTTTCTAGAGAGTTTATTGACGCGAATTATGCTTGCACAAGATACGGGGAGAAACGAGAATCCACGGCACAAAATCCGCGTCCATGTTTGAAGGTGGGATGTGAGGCCAGCTTACGAATTAAAAGAAATTGTGAAGGAAAATGGATTGTTCATAACTTCATCAAAGACCACAATCATGAGCTTTTTCCGACATATGCACATTATTTTCCTTGCCATAGAGGAATCAATAAAGCTCAAAAGCATGCTATTGAAACTTTGCAGCATGTTGGAGTGAGAACAACCAAAATTTATGCCTCAATGGCCAAACAATATGGAGGATACGAAAATATTGGTTGCTTGGAGAAAGATATTAGAAATCATTTAGATAAAGGTCGGCGTTTGGATTTAGAATCAGGAGATGCAAATTCAATGTTGGAGTGTTTTATGCTCATGCAAGAAGAAAATCCAAGATTCTTTTATGCAATTGATTTGGATGATGAAGACCGGATAAAAAATGTATTTTGGGTGGATGCAAAAGGTAGAGAAGACTATCAAGAGTTTGGAGATGTGATTTCATTTGATACCACTTATATCACAAATAAATACAAAATGCCATTTGCTCCTTTTATTGGTGTAAACAATCACTTTCAATCAAGGTTACTTGGTTGTGCATTACTCTCAGACGAGTCCATGCATACTTTCATATGGTTGATGAAAACATGGCTTAGAGCAATGGGTGGAAAACCTCCAAATGCAATTATAACAGATCAAGATAGGGCAATGAAAGCGGCTATTAAAGAGGTATTTCCAAATACTCGACATAGATTTTGTCTTTGGCATATACTTAAAAAGGTGCCTGAGAAGCTTAGTCATGTATTAACAAAAGATGAAGAGTTCAAGAGACATCTCAACATATGCATTTATAAGTCTTGGTCAAAACAACAATTTGAAGATAAATGGCATGAAATGGTGGAAAAATTTCAACTAATGGAAGATGGGTGGATTAGTTCATTATACGAAGAACGTGAACATTGGGTCCCTGTTTACATGAAGGATACATTTTTTGGTGGCTTGTCAACTACTCAAAGATCAGAGAGCATTAATGCTTTTTTTGACAAATATGTATGTAAGAAAACTACATTAAAAGAGTTTGTTGAAAAATATAAAGTTGCTTTACAGGATAGAGAAGAGGTAGAAAAGCAAGCAGATTTTAATACATGGCACAAGCAACCTGTTCTTAGGACTCCATCACCTTTTGAGAAGCAAATGTCGACTATTTATACGCATGAAATTTTCAAGAAATTTCAAGCTGAAGTTTTGGGATTATCTGGATGTCATATTGTGGAAGAGCATAAAGACAATCTAGTTACCACTTTTAAAATTTTCGACTTTGAGAAAAATGAAGAGTTTATTGTAGAATGTGATGTATCGAAAGAGGAAACATCTTGCCTATGTCACTTGTTTGAGTATAATGGGTATCTTTGTAGACATTCGTTAATGGCCCTCCAAGCTGCTGGTAAGGCTATTGAGTTGATCCACGAAGGATCACTAAGCTTTGAGAGTTCCAATGTTGCATTTCATGCACTTGAAGAGACCTTGAAACAATGTGTAACTATTAATAAATCTTTGAAAATCGGCAAGGAAAAAGTTGGTCAAAATAGTTCACATGAGAAATCACTGCGTGATCCTCGACCATCAAAAACAAAAGGGGCTCCTACAAAAAGAATGAAGAGTGGGATAGAAAAAGGTCATAAGAGAACATCTAGTGCTAAAGTAAAAAAGTCTGATATTGTTCAAAGAGAAGCAATAAACAACTCAAATGTCCTCAATGATGAAGTGCCTTTTCCATCAACAAGAATGGAAAATCAGCAGGGTTCAAGGAATTAA 2100 0.3595 MEVPDGNGEHIVDENEEDTLNEIAGNDSCPVDLEAINVIQEPYIGMEFDSQENAYSFYTQYAKCTGFGISIKNSRRSKVSREFIDANYACTRYGEKRESTAQNPRPCLKVGCEASLRIKRNCEGKWIVHNFIKDHNHELFPTYAHYFPCHRGINKAQKHAIETLQHVGVRTTKIYASMAKQYGGYENIGCLEKDIRNHLDKGRRLDLESGDANSMLECFMLMQEENPRFFYAIDLDDEDRIKNVFWVDAKGREDYQEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLSDESMHTFIWLMKTWLRAMGGKPPNAIITDQDRAMKAAIKEVFPNTRHRFCLWHILKKVPEKLSHVLTKDEEFKRHLNICIYKSWSKQQFEDKWHEMVEKFQLMEDGWISSLYEEREHWVPVYMKDTFFGGLSTTQRSESINAFFDKYVCKKTTLKEFVEKYKVALQDREEVEKQADFNTWHKQPVLRTPSPFEKQMSTIYTHEIFKKFQAEVLGLSGCHIVEEHKDNLVTTFKIFDFEKNEEFIVECDVSKEETSCLCHLFEYNGYLCRHSLMALQAAGKAIELIHEGSLSFESSNVAFHALEETLKQCVTINKSLKIGKEKVGQNSSHEKSLRDPRPSKTKGAPTKRMKSGIEKGHKRTSSAKVKKSDIVQREAINNSNVLNDEVPFPSTRMENQQGSRN 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03287 699 ProSiteProfiles Zinc finger SWIM-type profile. 541 577 IPR007527 GO:0008270
Trre7g03287 699 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 608 IPR031052 GO:0006355
Trre7g03287 699 SMART 26again6 552 579 IPR006564 GO:0008270
Trre7g03287 699 Pfam SWIM zinc finger 545 576 IPR007527 GO:0008270
Trre7g03287 699 Pfam FAR1 DNA-binding domain 56 141 IPR004330 -
Trre7g03287 699 MobiDBLite consensus disorder prediction 670 699 - -
Trre7g03287 699 Pfam MULE transposase domain 261 355 IPR018289 -
Trre7g03287 699 Coils Coil 452 472 - -
Trre7g03287 699 MobiDBLite consensus disorder prediction 621 669 - -
Trre7g03287 699 MobiDBLite consensus disorder prediction 619 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03287 Trre-Chr7 31665904 31668293 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre7g03287 MULE 3.2e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03287 - - tpra:123886760 1025.77