Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03268 ATGGGTAACGGAATAGGAAAATTAACGGTGTGTTTCACAGGAAACAACGGTGGTAACAGAAAACATGACATATCCATTTTAATAACGGATCCTTTAGACGAAGGTCTTGGTCACTCTTTCTGTTATGTTAGACCCGACCCGACCCGGTTATCTAGTTCCAAAGTTCATTCTGAAGAAACAACAACTTTCAGAACTATCTCTGGTGCTTCTGTCAGCGCTAACACGTCGACGCCGTTATCAACGGCGTTTATGGATTTATACTCTTACGGTTGTTTCGATAGAGCTGCTGCGTTTGAAAGTTCAACTTCTTTTGCTTCTCTTCCTTTACAACCGATTCCGAAGAATCTAATCGGTTCGGGTTCGGGTCCTTTTTCTGGTAATTTCGGTGGTGGTGGTGGTGGGTTTCCGAGTTCCGGTCCACTTGAGCGTGGTTTTATGTCCGGTCCGATTGAGCGTGGATTCATGTCCGGTCCAATTGATCGCGGTTTATTTTCCGGTCCGATTGAAAAAGAAAACTCCGATCAGTTTCAGAGAAGCTTTTCTCATAGTGGATTAGGTTTTTCCGTTCGTCCTAGAACGAGAAAAGAGAAATGGATTCGTGTTCTTCAGAGAGCGATTTCGAAGACTCTATCACGTGGACAGAACTCTATTGTTACTCCGATCAAAGGTGTAGCCGTTAAAGAACCACCGGAGTGGATTCTTGCCGGTGAGAAGCATCATAACGAGAATTTGACTGTGAGTAGTTTGAATTTGAGTAGTGAAGGTAGTTTGGAAGATGATGATTCTTTAGGTAGTCAGAATCTTCAATGGGCTCAGGGAAAAGCAGGGGAAGATCGTGTTCATGTTGTTGTTTCTGAAGAACATGGTTGGGTTTTTGTTGGAATTTATGATGGTTTTAATGGTCCTGATGCACCTGATTATTTACTTTCAAATCTTTATACTTTTGTTCATAAGGAACTTAAAGGATTGCTTTGGGATGATGGTGGTTCACCTGATAATTTGAATTCGAAACCGCGTGATTCGGTTGATGTTGTTGTTGGGAATGAAGATAAGGTGTTTGATGATTGTTCTCAATGTGTTGATCAAGAGAATTTGGATTCGGTTTCAAAGAGAAAAAAGAGAGGTAAGAATTCCAAGAATAAGTACAAAGATGCAGCGAAGAAACACGAAGAGAATCATAGGAGATGGAAGTGTGAATGGGATAGAGAAAGATTAGAGCTTGATAGAAGATTGAAGGAACAACTGAGTGGTGGTGACGGTGACGATAATTCTGTTAATCATGCAGATGTTTTGGAAGCTTTGTCTCGAGCTTTGAGGAAAACGGAGGAGTCTTATCTTGATGTTGCTGATAAGATGGTGATGGAGAATCCGGAACTTGCTTTGATGGGTTCATGTGTTCTTGTGATGTTGATGAAAGGGGAAGATGTTTATGTGATGAATGTGGGAGATAGTAGAGCTGTGTTGGCACAAAAAGCTGAACCTGATTATTGGATTGGGAAAATTAGACAGGATTTGGAGAGGATTAATGAAGAGACAATGCATGATCTTGAATCATGGGATGATGCTGATAAATCAAATGTTGTTCCTAGTTTAAGTGCTTTTCAGCTTACCAAGGATCATAGTACCAATGTTGAAGAGGAAGTACTCAGAATAATAAAAGAGCACCCGGATGATCCTTGTGCTGTGGTCAACGATCGTGTGAAGGGATCTCTCAAGGTTACTCGAGCATTCGGCGCTGGATTTCTCAAACAGCCCAAATGGAACAATGCACTTCTGGAGATGTTTAGAATAGACTACGTAGGAAATTCTCCATACATCACTTGCCAACCATACCTTAAACACCACAGATTAGGTCAAAAAGACAAATTTTTGATTCTATGCTCCGACGGACTCTATCAATATTTATCAAACGAAGAAGCAGTAGCTGAAGTTGAGCTTTTCATCACATTACAACCCGAAGGAGACCCTGCCCAACATTTGGTTGAAGAAGTCTTGTTTCGTGCTGCGAAGAAAGCTGGTTTGGATTTCCACGAATTGCTTGAAATTCCACAAGGCGATAGGCGGCGTTACCATGACGACGTTTCCATCATTGTTATTTCCTTGGAAGGAAGGATATGGAGATCATGTGTATAA 2133 0.4135 MGNGIGKLTVCFTGNNGGNRKHDISILITDPLDEGLGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFMDLYSYGCFDRAAAFESSTSFASLPLQPIPKNLIGSGSGPFSGNFGGGGGGFPSSGPLERGFMSGPIERGFMSGPIDRGLFSGPIEKENSDQFQRSFSHSGLGFSVRPRTRKEKWIRVLQRAISKTLSRGQNSIVTPIKGVAVKEPPEWILAGEKHHNENLTVSSLNLSSEGSLEDDDSLGSQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTFVHKELKGLLWDDGGSPDNLNSKPRDSVDVVVGNEDKVFDDCSQCVDQENLDSVSKRKKRGKNSKNKYKDAAKKHEENHRRWKCEWDRERLELDRRLKEQLSGGDGDDNSVNHADVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWIGKIRQDLERINEETMHDLESWDDADKSNVVPSLSAFQLTKDHSTNVEEEVLRIIKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYITCQPYLKHHRLGQKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03268 710 Coils Coil 372 399 - -
Trre7g03268 710 Gene3D - 240 706 IPR036457 -
Trre7g03268 710 FunFam probable protein phosphatase 2C 4 235 706 - -
Trre7g03268 710 CDD PP2Cc 407 701 IPR001932 -
Trre7g03268 710 ProSiteProfiles PPM-type phosphatase domain profile. 260 701 IPR001932 -
Trre7g03268 710 Pfam Protein phosphatase 2C 402 657 IPR001932 -
Trre7g03268 710 MobiDBLite consensus disorder prediction 367 388 - -
Trre7g03268 710 PANTHER PROTEIN PHOSPHATASE 2C 259 699 IPR015655 GO:0004722|GO:0006470
Trre7g03268 710 SUPERFAMILY PP2C-like 274 702 IPR036457 -
Trre7g03268 710 SMART PP2C_4 261 699 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03268 Trre-Chr7 31136806 31139617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03268 1 710 PP2C-type Phosphatase Gene Family AT1G07630 69.114 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03268 - - pvu:PHAVU_011G064200g 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03268 7 31136806 31139617 Trre7g03268 7 31136806 31139617 ECH