Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03266 ATGGGAATTAGTATTGTTTCTGCCATGGGAGTTTGTTTGCGCAACCACGTCAAAGCTGAGAGCCCAATCAATTCTGTTTCAGGGTTAAATTCAAAGAGTGTGAATGTCAGTACAGAAAATATCAGTAGCACATACAGTAAGGTTTCTGATGACCTCGGTGGCTCAAGTAATACTGGAGTACCAGCGGAATCGGTATTGGCCCCTCGGACTGCTCGTGCTGTGGATGAGATCTTGCAATTATCCAATTTGAAGACCTTTACTTCTACAGAACTTCAGGCTGCAACCAGAAATTTTCATGTAGACAGTGTGTTAGGAGATTATGGTATTGGATCAGTTTATAAGGGTTGGATTGATGAAAACTCAACTTCTGCTACCAAACCTGGCAAAGGCATTGCTGTTGCTGTCAAAAGACTTAATCATGATGGCTTCAAAGGTCACAAGGATTTGTTAGCTGAAGCCAACTATCTAGGCCAGCTTTCACATCCTCATCTAGTGAAATTGATTGGATATTGCCTTGAAGATGAAAACAGCCTTATGGTCTATGAATTTATGCTTCGTGGCAGCTTGGAGAATCACTTGTTCATAAGAGGTTCATATTTTCAACCTCTTTCTTGGAACCTACGTTTGAAGGTTGCTCTTGGTGCTGCAAAAGGCCTTGCATTTCTTCACAGTGCTGAAACCAAAGCGACATACCGTGATTTCAAGACTTCAAATGTCTTGCTAGATTCAAATTATAATGCAAAACTTTCTAATTTTGGGCTGGCAAAGGGCGGGACTGCAGTTGATAAAAGAAGGCTAACCTATGGATATGCAGCTCCAGAATACCTAGCCACTGGTAATCACACTGCCAAAAGTGATGTCTATAGTTTTGGAGTTGTCCTATTGGAAATATTATCAGGGAGGAGAATTGTTGACAAGAATAGACCACAAAGACAACACAATTTGGTGGAATGGGCTAAGCCTTATCTATCCAACAAGCGCAAGATTTTGCGCGTTTTGGATAATCGTCTTGAAGGCCAATACGAATTGGAAGATGTTCATAAGGTTGCTATACTCTCCCTACGGTGTCTTTCAATAGAAGCCAAGTTGAGACCAAACATGGAAGATGTTGTTACAAATTTGGAGCTGTTGCAGGTTCCTAATGTAAATGAATACAGTAAGAATCGTTTGCGTAGAAAAAGTGCCGATGATGTTCCCCGTGTTAGAACAGCTTCTGCTTATCCCCAACGCTCTACTTCTATGCTTGAAAGTTAA 1254 0.4115 MGISIVSAMGVCLRNHVKAESPINSVSGLNSKSVNVSTENISSTYSKVSDDLGGSSNTGVPAESVLAPRTARAVDEILQLSNLKTFTSTELQAATRNFHVDSVLGDYGIGSVYKGWIDENSTSATKPGKGIAVAVKRLNHDGFKGHKDLLAEANYLGQLSHPHLVKLIGYCLEDENSLMVYEFMLRGSLENHLFIRGSYFQPLSWNLRLKVALGAAKGLAFLHSAETKATYRDFKTSNVLLDSNYNAKLSNFGLAKGGTAVDKRRLTYGYAAPEYLATGNHTAKSDVYSFGVVLLEILSGRRIVDKNRPQRQHNLVEWAKPYLSNKRKILRVLDNRLEGQYELEDVHKVAILSLRCLSIEAKLRPNMEDVVTNLELLQVPNVNEYSKNRLRRKSADDVPRVRTASAYPQRSTSMLES 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03266 417 Pfam Protein tyrosine and serine/threonine kinase 100 374 IPR001245 GO:0004672|GO:0006468
Trre7g03266 417 PANTHER OS01G0588500 PROTEIN-RELATED 46 378 - -
Trre7g03266 417 Gene3D Phosphorylase Kinase; domain 1 73 183 - -
Trre7g03266 417 SUPERFAMILY Protein kinase-like (PK-like) 79 382 IPR011009 -
Trre7g03266 417 ProSiteProfiles Protein kinase domain profile. 98 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03266 417 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 184 388 - -
Trre7g03266 417 Gene3D Transferase(Phosphotransferase) domain 1 184 398 - -
Trre7g03266 417 FunFam Serine/threonine-protein kinase BIK1 66 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03266 Trre-Chr7 31023944 31026115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03266 75 377 Glycoside Hydrolase AT3G07070 44.409 5.31e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre7g03266 PK_Tyr_Ser-Thr 2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03266 - - gmx:100788856 511.531