Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03265 ATGGGAATTAGTATTGTTTCTGCCATGGGAGTTTGTTTGCGCAACCACGTCAAAGCTGAGAGCCCAATCAATTCTGGGTTAAATTCAAAGAGTGTGAATGTCAGTACAGAAAATATCAGTAGCACATACAGTAAGGTTTCTGATGACCTCGGTGGCTCAAGTAATACTGGAGTACCAGCGGAATCGGTATTGGCCCCTCGGACTGCTCGTGCTGTGGATGAGATCTTGCAATTATCCAATTTGAAGACCTTTACTTCTACAGAACTTCAGGCTGCAACCAGAAATTTTCATGTAGACAGTGTGTTAGGAGATTATGGTATTGGATCAGTTTATAAGGGTTGGATTGATGAAAACTCAACTTCTGCTACCAAACCTGGCAAAGGCATTGCTGTTGCTGTCAAAAGACTTAATCATGATGGCTTCAAAGGTCACAAGGATTTGTTAGCTGAAGCCAACTATCTAGGCCAGCTTTCACATCCTCATCTAGTGAAATTGATTGGATATTGCCTTGAAGATGAAAACAGCCTTATGGTCTATGAATTTATGCTTCGTGGCAGCTTGGAGAATCACTTGTTCATAAGAGGTTCATATTTTCAACCTCTTTCTTGGAACCTACGTTTGAAGGTTGCTCTTGGTGCTGCAAAAGGCCTTGCATTTCTTCACAGTGCTGAAACCAAAGCGACATACCGTGATTTCAAGACTTCAAATGTCTTGCTAGATTCAAATTATAATGCAAAACTTTCTAATTTTGGGCTGGCAAAGGGCGGGACTGCAGTTGATAAAAGAAGGCTAACCTATGGATATGCAGCTCCAGAATACCTAGCCACTGGTAATCACACTGCCAAAAGTGATGTCTATAGTTTTGGAGTTGTCCTATTGGAAATATTATCAGGGAGGAGAATTGTTGACAAGAATAGACCACAAAGACAACACAATTTGGTGGAATGGGCTAAGCCTTATCTATCCAACAAGCGCAAGATTTTGCGCGTTTTGGATAATCGTCTTGAAGGCCAATACGAATTGGAAGATGTTCATAAGGTTGCTATACTCTCCCTACGGTGTCTTTCAATAGAAGCCAAGTTGAGACCAAACATGGAAGATGTTGTTACAAATTTGGAGCTGTTGCAGGTTCCTAATGTAAATGAATACAGTAAGAATCGTTTGCGTAGAAAAAGTGCCGATGATGTTCCCCGTGTTAGAACAGCTTCTGCTTATCCCCAACGCTCTACTTCTATGCTTGAAAGTTAA 1248 0.4119 MGISIVSAMGVCLRNHVKAESPINSGLNSKSVNVSTENISSTYSKVSDDLGGSSNTGVPAESVLAPRTARAVDEILQLSNLKTFTSTELQAATRNFHVDSVLGDYGIGSVYKGWIDENSTSATKPGKGIAVAVKRLNHDGFKGHKDLLAEANYLGQLSHPHLVKLIGYCLEDENSLMVYEFMLRGSLENHLFIRGSYFQPLSWNLRLKVALGAAKGLAFLHSAETKATYRDFKTSNVLLDSNYNAKLSNFGLAKGGTAVDKRRLTYGYAAPEYLATGNHTAKSDVYSFGVVLLEILSGRRIVDKNRPQRQHNLVEWAKPYLSNKRKILRVLDNRLEGQYELEDVHKVAILSLRCLSIEAKLRPNMEDVVTNLELLQVPNVNEYSKNRLRRKSADDVPRVRTASAYPQRSTSMLES 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03265 415 Gene3D Transferase(Phosphotransferase) domain 1 182 396 - -
Trre7g03265 415 SUPERFAMILY Protein kinase-like (PK-like) 77 380 IPR011009 -
Trre7g03265 415 ProSiteProfiles Protein kinase domain profile. 96 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03265 415 Pfam Protein tyrosine and serine/threonine kinase 98 372 IPR001245 GO:0004672|GO:0006468
Trre7g03265 415 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 182 386 - -
Trre7g03265 415 FunFam Serine/threonine-protein kinase BIK1 64 181 - -
Trre7g03265 415 Gene3D Phosphorylase Kinase; domain 1 71 181 - -
Trre7g03265 415 PANTHER OS01G0588500 PROTEIN-RELATED 45 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03265 Trre-Chr7 31023944 31026115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03265 73 375 Glycoside Hydrolase AT3G07070 44.409 4.68e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre7g03265 PK_Tyr_Ser-Thr 2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03265 - - lja:Lj3g3v3200890.1 515.383