Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03247 ATGGATCCTCGTTTTAATTCCAATTGCATCAACGGTTTCAAATCAAACCAAATTCCCAATACAGTCGATGGATTCATAGATAACCCTTTTCTTCATCAACCACATGATCCAAACACAGAAGAAGATTCTCCTTTGGATGAAACTGATTTTTCTTCAACTGTTCTTCGTTACATAAACCAAATGCTTATGGAAGAAGACATGGAGAAGAAACCATGTATGTTTCATGATTTATTAGCTTTACAAGCTGCTGAAAAATCATTCTATGAAGTCATTGGTGAGACATACCCTTCTTCTAGTTCAATTCAAAATCATCACAATGTGGATAGTCCTGATGATAGTCTTGGTAGTAATTTTAGTACTTATAGCAATTGTGGTAACACTAGTAGTAGTAATAATTCTGTTGAGTTTGAGTCTTATTGGAGTAATTTTGATGTTTCTGAGTATAAGCCTTCTATACTGCAAACCGTGTTTCCTGCTGATTTTGTTTTTCAGGCTAGTTCAATGAATGGTTATGGTTATGGTAATGGTAATACTACTAGCAGTAGCAATTTCGTTGTAACGAATAGTGGATTTTTGGATGGATTTCCTGATTCGAATTTGCTTAGTAAGAGTGAGTCGGTACTGCAATTTCAGAGGGGTGTTGAGGAAGCTAATAAGTTTCTGCCGAAAGTGAATCCCTTGGTTATTGACCTGGAGAACAACCACCCTTTTATCCCTTCTTTTAGGAAGGTTCCTCAAGAGGTAGTAGTTAAGACGGAGAGTAGTGAAAGAGAGCATTTTTCTGTTGAGTCGAGGGGGAGGAAGAATCATGAACGGGGAGATGAAACGGATTTACAAGATGAGAGAAGCAATAAGCAGTCGGCTGTTTACACTGATGACAGTGAGCTGTCGGAGCTGTTTGATAAGGTGTTGCTTGGTACAGGGTGCAGAAAGGAGGGAGCTCCTATGTGTAATAGTAAGGAAGAGAAGCCTAATGAACATGTTACAGGTGTTCAGCAGAAAGAAGAAGCGAACAATTCTGGTGGTGGAAAGAGTCGTGCTAAGAAACAAGGCAGCAAGAAGGGTGTTGTGGATTTGAGGACAATGTTGATTCTGTGTGCACAATCTGTTTCTTCCGATGACCGCGCAACTGCTAAGGAATTATTAAAGCAGATAAGACAACATTCTTCTCCACTTGGTGATGGATCTCAGAGGCTGGCACATTGCTTTGCAAATGCCCTTGAAGCACGCTTGGCTGGCACTGGTACTCAGATTTATACTGCTTTATACTCCAAAAGAAACTCTGCTGCTGACATGGTGAAAGCTTATCAAATGTATATTTCAGCCTGTCCGTTCAAGAAGCTTGCTATCATTTTTGCAAACCATACAATTTTGAATCTAGCCAAGGAAGTAGAAACTCTTCACATTGTAGATTTTGGCATCCGTTATGGCTTCCAATGGCCTGGCCTTATTTATCGTCTATCAAAACGACCTGGTGGACCTCCCAAGCTGCGCTTGACAGGGATAGAGCTCCCTCAACCTGGTTTCAGGCCTGCAGAGAGAGTCCAGGAGACAGGGCTTCGCCTGGCAAAGTATTGTGACCGTTTTAATGTTCCATTTGAGTTTAATGCTATTGCACAGAAATGGGAAACCGTCAAAGTTGAGGACTTGAAGATACAGAAAAATGAACTTCTTGTGGTAAATTGTATATGTCGATTTAAAAATCTACTTGATGAGACAGTAGTATTGAATAGTCCCAGGGATGCTGTTTTAAAATTAATTAAGAATGCAAATCCCAATATCTTTATACATACTACTGTCAATGGGAGCTATAATGCTCCATTCTTTGTGACACGCTTTAAGGAGGCTCTTTTCCATTACTCTACAATGTTTGATGTGCTTGACGTCAATGTTGCCCGTGAAGAATCAATGAGGTTGATGTTTGAGAAAGAGTTCTGGGGGCGGGAGGTAATGAATACTATAGCTTGTGAGGGTTCTGAGAGGGTTGAGAGGCCAGAGACATACAAGCAATGGCAGGTTCGGAACATAAGGGCTGGATTTAGGCAACTTCCCTTGGATAAACATCTCATTAACAAGTTAAGATGCAAGTTGAAAGATGTCTATCATAGTGATTTCATGCTTGTTGAAGATGGCAACTGCATGCTGCAAGGTTGGAAGGGCCGAATAGTGTATGCTTCATCCTGTTGGAGCCCTTATCTTGAATCAAGCAACAATTCAGAAACAAAAAAGATGGATCCAAATTTTCCTCAAGCTTTCATAAACGGTTACTACCACTTTGATGAAGAAGGAAGCATATTGGTTTCTGGGTCTGATCCAAATCAGTATGATAGTTTCCTTGATGCTGATCCAAATCAATATGATAACTTCCTTGATGCTGATCCAAATCAATATGATAACTTCCTTGATGCTGATCCAAATCAATATGATAGCTTCCTTGATGATGATACACTTGGTTTTGCAGCCACCACCTTCCCTATAGAAGGTTCTATGGGCTTGGTGACAGATCCTTCCCTGGAAGATGCTGATTTTTCAGATACTGGAAAGTTCATAAACCAAATCTTGATGGAAGAAAATGTCGACCAGAGACCATTTTATGATCCACTTAGTTTGCAAATCACAGAAAAATCATTCTATGATGCTCTCTTGCACCAAAATAAACCTCCTTCACCTAATCAACATCCCTTAGATATTCATCACTCTGATGGAACAAACAGCACCAGTAGTAACAACAATAGCAATAGTAATAGTAGCAGCGACGATTCTCGAGAGATGATACCCCTTTCCCCTGATACCGCTGTTTCTGATCTTGGTGATCATGTTTTTCAGTTTAATTCCCCTGCCATTTCTCACACTTTCTCTCAACCTCATTCTACTAGTGATGCACTCAGAGATTTGGATTCTTCTATTACAAAGATGGCACAAAACATTTTTAGTGATGCAGATTCTGTTTCCCTATTCAAGAAAGGTGTAGAAGAAGCCAACAAGTTTCTTCCTCCGCAGCCTCAACTCTTGACTGGTTTTGAATCATCCAATTTCAATGTGGTTAAGGAGAAAGAGAATCCGTTTGTGTTGAAGCATAGAAAGAATCACAAGCGAGAAGAAAGTTATAACAACGAAGAAGACGAAGAAGCTGGTAGGAGAAGTAGCAAACAATCAGCTATTAGTGTTGTTGACGAGGATGAATTATCCGAGATGTTTGATAAAGTTTTGCTTAATGTCGAACATTTGCCACTATGCAATGGAAATGATTGCTCGCAGACTGGACAAGTGAAAACGGAGCAGTCACCTCCATCTAATGAAGGGAAAACTCGTCCTAAGAAACAAGGCAAAAAGAAGGATACAATAGATTTGAGGAATCTTCTGCTTCTGTGTTCACAATCTGTGTATGCCAATGACAACAGAAATGCTAATGAACTACTGAAGCAGATTAGGCAACATTCTTCACCCTTTGGAGATGCACCACAAAGGCTAGCTCATTATTTTGCCAATGGCCTTGAGGCACGCCTTGTCGGTAATGGTACTAATGCACAAGTGTTCTATTCTTCGCCAAGTTCCAAGAGGATCAGTACTGCTGAGTTTTTGAAAGCATATCAAGTTCATCTATCTAGTAGCCCATTCAAAAAGTTTGCATTCTTTTTTGCAAATAAAATGATTATGGATGTTGCTGCAAATGCTGAAACCCTTCATATCATTGATTTTGGTATCCTATATGGTTTTCAGTGGCCAATACTTATTAAGTTTTTAGCAGATAGAGAAGTTGGACCTCCAAAGCTGAGGATCACCGGGATAGAGTTCCCTTTGCCCGGCTTCCGTCCAATGGAAAAAATTGAGGAAACTGGCCGTCGTCTTGCTAACTATTGCAAGCGTTTCAATGTTCCCTTTGAGTTTAATGCCATAGCATCGCGGAATTGGGAAACAATTCGAGTTGAAGATCTTAAAATTGGGAGCAATGAGGTAGTTGTTGTGAACAGTTTGATGAGGTTTAAGAATTTACTGGATGAAAGTATTGAAGTGAACAGTCCAAGAAACGCGGTTCTGCAATTGATCAGGAAAATAAACCCTGCTATTTTTGCTCAGTCCATTGTTAATGGATCATATAATTCGCCTTTCTTTGCTACACGGTTTAGGGAGGCACTGTTTCATTTTTCTGCTCTTTATGATATGTTTGACACTGTCATACCGCGTGAAAACGAACATAGGATGATGATGGAGAAGGAAAGTGTGGGCAGGGAAGCTATGAATGTTGTAGCATGTGAAGGCTTAGAGAGAATTGAGAGGCCTGAGACATACAAACAATGGCAGGTTAGGAATACAAGAGCTGGTTTCAAGCAACTTCCATTGAAGTCAGAATTAATGGACAAATTTAGGCTAAAGTTAAGTAAGTACCATAAAGATTTTGTATTTGATGAAGACAACAATTGGATGCTTCAAGGTTGGAAAGGTCGCATTTTATATGCTTCAACATGTTGGGTGCCAGCATAA 4482 0.3992 MDPRFNSNCINGFKSNQIPNTVDGFIDNPFLHQPHDPNTEEDSPLDETDFSSTVLRYINQMLMEEDMEKKPCMFHDLLALQAAEKSFYEVIGETYPSSSSIQNHHNVDSPDDSLGSNFSTYSNCGNTSSSNNSVEFESYWSNFDVSEYKPSILQTVFPADFVFQASSMNGYGYGNGNTTSSSNFVVTNSGFLDGFPDSNLLSKSESVLQFQRGVEEANKFLPKVNPLVIDLENNHPFIPSFRKVPQEVVVKTESSEREHFSVESRGRKNHERGDETDLQDERSNKQSAVYTDDSELSELFDKVLLGTGCRKEGAPMCNSKEEKPNEHVTGVQQKEEANNSGGGKSRAKKQGSKKGVVDLRTMLILCAQSVSSDDRATAKELLKQIRQHSSPLGDGSQRLAHCFANALEARLAGTGTQIYTALYSKRNSAADMVKAYQMYISACPFKKLAIIFANHTILNLAKEVETLHIVDFGIRYGFQWPGLIYRLSKRPGGPPKLRLTGIELPQPGFRPAERVQETGLRLAKYCDRFNVPFEFNAIAQKWETVKVEDLKIQKNELLVVNCICRFKNLLDETVVLNSPRDAVLKLIKNANPNIFIHTTVNGSYNAPFFVTRFKEALFHYSTMFDVLDVNVAREESMRLMFEKEFWGREVMNTIACEGSERVERPETYKQWQVRNIRAGFRQLPLDKHLINKLRCKLKDVYHSDFMLVEDGNCMLQGWKGRIVYASSCWSPYLESSNNSETKKMDPNFPQAFINGYYHFDEEGSILVSGSDPNQYDSFLDADPNQYDNFLDADPNQYDNFLDADPNQYDSFLDDDTLGFAATTFPIEGSMGLVTDPSLEDADFSDTGKFINQILMEENVDQRPFYDPLSLQITEKSFYDALLHQNKPPSPNQHPLDIHHSDGTNSTSSNNNSNSNSSSDDSREMIPLSPDTAVSDLGDHVFQFNSPAISHTFSQPHSTSDALRDLDSSITKMAQNIFSDADSVSLFKKGVEEANKFLPPQPQLLTGFESSNFNVVKEKENPFVLKHRKNHKREESYNNEEDEEAGRRSSKQSAISVVDEDELSEMFDKVLLNVEHLPLCNGNDCSQTGQVKTEQSPPSNEGKTRPKKQGKKKDTIDLRNLLLLCSQSVYANDNRNANELLKQIRQHSSPFGDAPQRLAHYFANGLEARLVGNGTNAQVFYSSPSSKRISTAEFLKAYQVHLSSSPFKKFAFFFANKMIMDVAANAETLHIIDFGILYGFQWPILIKFLADREVGPPKLRITGIEFPLPGFRPMEKIEETGRRLANYCKRFNVPFEFNAIASRNWETIRVEDLKIGSNEVVVVNSLMRFKNLLDESIEVNSPRNAVLQLIRKINPAIFAQSIVNGSYNSPFFATRFREALFHFSALYDMFDTVIPRENEHRMMMEKESVGREAMNVVACEGLERIERPETYKQWQVRNTRAGFKQLPLKSELMDKFRLKLSKYHKDFVFDEDNNWMLQGWKGRILYASTCWVPA 1493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03247 1493 MobiDBLite consensus disorder prediction 1025 1048 - -
Trre7g03247 1493 Pfam GRAS domain family 1117 1490 IPR005202 -
Trre7g03247 1493 Pfam GRAS domain family 359 729 IPR005202 -
Trre7g03247 1493 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 294 723 IPR005202 -
Trre7g03247 1493 ProSiteProfiles GRAS family profile. 1108 1491 IPR005202 -
Trre7g03247 1493 ProSiteProfiles GRAS family profile. 350 730 IPR005202 -
Trre7g03247 1493 MobiDBLite consensus disorder prediction 1082 1102 - -
Trre7g03247 1493 MobiDBLite consensus disorder prediction 882 931 - -
Trre7g03247 1493 MobiDBLite consensus disorder prediction 1025 1056 - -
Trre7g03247 1493 MobiDBLite consensus disorder prediction 28 48 - -
Trre7g03247 1493 MobiDBLite consensus disorder prediction 1082 1111 - -
Trre7g03247 1493 MobiDBLite consensus disorder prediction 315 330 - -
Trre7g03247 1493 MobiDBLite consensus disorder prediction 252 293 - -
Trre7g03247 1493 MobiDBLite consensus disorder prediction 885 924 - -
Trre7g03247 1493 MobiDBLite consensus disorder prediction 331 346 - -
Trre7g03247 1493 MobiDBLite consensus disorder prediction 252 288 - -
Trre7g03247 1493 MobiDBLite consensus disorder prediction 312 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03247 Trre-Chr7 30798539 30805178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03247 54 731 GRAS Transcription Factor Family AT1G07530 56.919 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre7g03247 GRAS 8.1e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03247 - - cave:132163068 1458.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03247 7 30798539 30805178 Trre7g03247 7 30798539 30805178 ECH