Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03246 ATGGATTATTCAAACTGTGATGCTGATGAGTTTCAACAAGGTTCTATGGAAACCTTGCCCATGGAAGACACTGATTTTTCAGAAACCATAAAGTTCATAACCCAAATCCTTATGGAAGAAAACTTTGACAAGAAACCCTTTTATGATCCACTTAGCTTACAAATCACAGAAAAATCATTCTTTGATGCTCTTTCCCCCAATCAACACCCCTTAGATTTTCATAACTCTGATGAAAGAATCAGCAGCACTAATGATAGCTCAACAAAACCTCTTTCAACTAGTGTTAGTGATGGACTTGTAGATTTGGATTCTTCTATTACCAATTTGTTAGCACAAAACAATTTTAGTAATGCAGATTCTGTTTCCCAATTCAAGAGAGGTTTTGAAGAAGCCAACAAGTTTCTTCCTCCTCAGCCTCAACTCTTGACTAGTCTAGAATCGTCAAACTTCAATATGGTTGAGGAGAAAGAGAATCCATTTGTGTTGAAAGGTAGAAAGAATCACGAGCGCGAAGAAGATGAAGAAGGGAGGAGAAATAACAAGCAATCGGCTATTGGTGGTGTTGTTGATGAGGATGAGCTATCAGAAATGTTTGATAAAGCTTTACTTAACGTCGAAAATGAGTGCTTGCCGAATGAGAAGCTTCCTTCAGCTAATGGAGCAAAGGCTCGTCCTAAGAAACATAATAGCAAAAACGAAAGGATTGATTTGAGAAATCTTCTGCTTTTGTGCTCACAAGCTTTGTATGCCAATGACAACAGGAATGCTAATGAATTACTGAAGCAGATTAGGCAACATTGTTCGCCCTTTGGAGATGCATCACAGAGGGTGGCACATTACTTTGCTAATGGCATTGAGGCACGCCTTGCAGGCGATGGAACCGACGCACAAACATTTTATTCCTCGCCAAGGATCACTGCTGCTGAGTTTTTGAAAGCATACCAAGTTCATTTTATTAGTCCTCCATTCAAAAAGTTTGCATATTTGTTTGCCGATAAAATGATAATGAAAGTGGCTAAAAAGGCTGAAACCCTTCATATCATTGATTTTGGTATCCTTTATGGTTTTCAGTGGCCGATGCTTATTAAGTACTTATCAAATAGAGAAGGTGGACCTCCAAAGTTGAGAATCACTGGGATAGAGTTCCCTTTACCTGGCTTTCGTCCGACTGAAAGAATTGAGGAGACTGGTCGACGTCTGGCCAATTACTGCAAGCGTTTCAGTGTTCCTTTCGAGTACAATTTCATAGCGTCGCGGAACTGGGAAGCAATTCGATTTGAAGATCTTAAAATTGAAAGCAATGAGGCAATCGCTGTTAACTGTATGATGAGGTTTGAGAATTTACTAGATGAGAGTATCAAAGTGAACAGTCCTAGAAATGTGGTTCTGCATTTGATTAGGAAGATAAATCCTGATATTTTTACTCTTTCCATTGCTAATGGATCGTATAATTCACCTTTCTTTGCAACGCGGTTTAGGGAGGCATTGTTTCAGTTTTCTACTATTTATGATATGTTGGACACTGTCATACCAAGGGAAAGTGAATGGAGGACGATGTACGAGAAGGAAATCATAGGTAGGGAAGTTATGAATGTTGTAGCTTGTGAAGGTTTAGAGAGAGTTGAGAGGCCTGAAACATATAAAATGTGGCAGGTTAGGAATATTAAGGCTGGTTTCAAGCAGCTTCCATTGGACTCAGAATTAATGGCAACATTTAGGACAAAGTTAAAGCAGTGGTACCATAGAGATTTTGATTTTGATGAAGAAAATAATTGGATGCTTCAAGGTTGGAAAGGTCGTATTTTATACGCTTCAACTTGTTGGGTGCCTGCATAA 1836 0.3894 MDYSNCDADEFQQGSMETLPMEDTDFSETIKFITQILMEENFDKKPFYDPLSLQITEKSFFDALSPNQHPLDFHNSDERISSTNDSSTKPLSTSVSDGLVDLDSSITNLLAQNNFSNADSVSQFKRGFEEANKFLPPQPQLLTSLESSNFNMVEEKENPFVLKGRKNHEREEDEEGRRNNKQSAIGGVVDEDELSEMFDKALLNVENECLPNEKLPSANGAKARPKKHNSKNERIDLRNLLLLCSQALYANDNRNANELLKQIRQHCSPFGDASQRVAHYFANGIEARLAGDGTDAQTFYSSPRITAAEFLKAYQVHFISPPFKKFAYLFADKMIMKVAKKAETLHIIDFGILYGFQWPMLIKYLSNREGGPPKLRITGIEFPLPGFRPTERIEETGRRLANYCKRFSVPFEYNFIASRNWEAIRFEDLKIESNEAIAVNCMMRFENLLDESIKVNSPRNVVLHLIRKINPDIFTLSIANGSYNSPFFATRFREALFQFSTIYDMLDTVIPRESEWRTMYEKEIIGREVMNVVACEGLERVERPETYKMWQVRNIKAGFKQLPLDSELMATFRTKLKQWYHRDFDFDEENNWMLQGWKGRILYASTCWVPA 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03246 611 MobiDBLite consensus disorder prediction 163 180 - -
Trre7g03246 611 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 171 604 IPR005202 -
Trre7g03246 611 MobiDBLite consensus disorder prediction 71 94 - -
Trre7g03246 611 ProSiteProfiles GRAS family profile. 228 609 IPR005202 -
Trre7g03246 611 Pfam GRAS domain family 237 608 IPR005202 -
Trre7g03246 611 MobiDBLite consensus disorder prediction 163 184 - -
Trre7g03246 611 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03246 Trre-Chr7 30794414 30796249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03246 29 611 GRAS Transcription Factor Family AT1G07530 45.109 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre7g03246 GRAS 1.3e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03246 - - tpra:123918580 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04439 11 56699506 56701940 Trre7g03246 7 30794414 30796249 PCT