Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03245 ATGTTATCTACCGATACACTTGTTGAGAATTTTCCTGGTTCTGTCAATGGATGCATGTTTGGAAACATTCCTGTTTCTGTTTTTTCAAATCAGAATCCAGAAAATGGTTTCAAATTTGAAGATTCAAATTCAATATCAATATCCCCTTCAAGTCATTCAGATTCTGCAAATGATTCTGTTACTCCATCTTCTGGTGAATCTTCTGAGAGTAGTAAATATTCAAATCCTATTCTTAGATTTATAAGTGATATTCTCATGGATGAAGAAGATTATTTGGAGAAAACACCTTGTATGTTGCAAGATTGTTTGAAACTTCAAGCTGCTGAAAAATCATTTTATGATGTTTTAGGTAATAATAATTTTCATGCAGGAACAGTAGTAACTAGTACTAGTACTAGTTCTTCTGAGAGCTATAGTAATTCTAGTTATACCACTGATAATTCTATAGTTGATTATGATTCACCTGAAAATAATACCTATGAGGTGTTTGATAAAATGCCTCATGATCCAATTAGTGATACACAAGCTGTTTTCAATATTCCAAATGATGATGCTTGGAAGATGAATCAAGAGGGTACATTGATTTTGGGTTCTAGAGGAGGATCAAGGGAAAAGAGAGGTCTTTTGATGAATGATATTGGTATCTTACATGAAGAGGATCTGAGAAGTAGCAAGGTTTCAGCTGTTTATTCTGATGATTCTGAGTTATCAGAGATGTTTGATGAGGTACTTCTTTGTAAGGATGGTAAAAGTCCATCCATTTTTGGTGCTAATTCTAAACAATCGCATTCACATGTTTCTAGTTCTTTAGGATCTAATGGAAAAACATCGCGTTCTAAGAAAGGTTCAAACAAGAGTAAAAGTAGTCTAAGTACTACGGTAGATTTATGGACTTTGTTAACTCAATGTGCACAAGCTGTTGGTAGCTATGATCAAAGGAATGCAAATGATATACTCAAGCAGATTAGGCAGCACTCTTCATCGCGTGGTGATGGACTACAGCGTTTAGCTCATTACTTTGCTGATGGCCTCGAGGCACGGTTAACTGCTGGGTCGCCGATGTATAAACAACTTCAGTCGTCGTCTTCTGCAGATATGTTAAAAGCTTTCAAAGTTTACATCACAGCATCTCCATTTCTACGGATGTCAAATTTCTTGGCAAACAGAACTATTCTCAGTCTGGCACAAAACAAAAGCAGCCTTCATATTATTGACTTTGGTATTTTCTATGGCTTTCAGTGGCCTTGCCTCATTCAGCGTCTTTCGGAAATGCCTGATGGGCCACCGAGGCTTCGTATTACAGGAATTGATCTTCCTCAGCCAGGATTTAGGCCTGCAGAAAGAGTTGAAGATACAGGTCGGCGACTTGAAAAGTACTGCAAGAGGTTTGGAGTTCCATTTGAGTACAATTGTCTTGCACAGAAATGGGACACTATAAGACTTGAGGATCTCAAGATTGATAGAGAAGAAGTAACAGTGGTTAACTGTTTATACAGATTGAAGAACCTTTCCGATGAAACAGTGACAGCGAATTGTCCAAGAGATGCTGTGTTGAGGTTGATAAGGAGGATTAATCCAAACATTTTCATACATGGAGTAGTGAATGGAACATATAATGCACCATTTTTTCTTACTAGGTTCAGGGAAGCACTGTTTCATTTCTCATCATTGTTTGATATTCTTGAAGCTACTGTGCCGCGTGAGGATCCATATAGGTTGATGTTTGAGAAAGGGTTATTTGGAAGGGATGCAGTGAATGTGATAGCTTGTGAGGGAGCAGAGAGAGTTGAAAGGCCAGAGACTTACAAGCAGTGGCAGGTTAGGAACAAGAGAGCAAGGTTCAGGCAACTTCCATTGGCTCCAGAATTGGTGGATAGGGTAAAAGAAATGGTGAAGAAGGAATATCCGAAAGATTTTGTAGTTGATGAGGATGGGAAGTGGGTTCTGCAGGGTTGGAAAGGACGTATTCTGCATGCTATTTCTTGTTGGGTTCCTGCTTAA 2001 0.3838 MLSTDTLVENFPGSVNGCMFGNIPVSVFSNQNPENGFKFEDSNSISISPSSHSDSANDSVTPSSGESSESSKYSNPILRFISDILMDEEDYLEKTPCMLQDCLKLQAAEKSFYDVLGNNNFHAGTVVTSTSTSSSESYSNSSYTTDNSIVDYDSPENNTYEVFDKMPHDPISDTQAVFNIPNDDAWKMNQEGTLILGSRGGSREKRGLLMNDIGILHEEDLRSSKVSAVYSDDSELSEMFDEVLLCKDGKSPSIFGANSKQSHSHVSSSLGSNGKTSRSKKGSNKSKSSLSTTVDLWTLLTQCAQAVGSYDQRNANDILKQIRQHSSSRGDGLQRLAHYFADGLEARLTAGSPMYKQLQSSSSADMLKAFKVYITASPFLRMSNFLANRTILSLAQNKSSLHIIDFGIFYGFQWPCLIQRLSEMPDGPPRLRITGIDLPQPGFRPAERVEDTGRRLEKYCKRFGVPFEYNCLAQKWDTIRLEDLKIDREEVTVVNCLYRLKNLSDETVTANCPRDAVLRLIRRINPNIFIHGVVNGTYNAPFFLTRFREALFHFSSLFDILEATVPREDPYRLMFEKGLFGRDAVNVIACEGAERVERPETYKQWQVRNKRARFRQLPLAPELVDRVKEMVKKEYPKDFVVDEDGKWVLQGWKGRILHAISCWVPA 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03245 666 ProSiteProfiles GRAS family profile. 287 664 IPR005202 -
Trre7g03245 666 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 252 657 IPR005202 -
Trre7g03245 666 MobiDBLite consensus disorder prediction 256 288 - -
Trre7g03245 666 MobiDBLite consensus disorder prediction 129 151 - -
Trre7g03245 666 MobiDBLite consensus disorder prediction 39 72 - -
Trre7g03245 666 Pfam GRAS domain family 298 663 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03245 Trre-Chr7 30788902 30790902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03245 222 666 GRAS Transcription Factor Family AT1G07530 56.098 6.73e-178 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre7g03245 GRAS 3.7e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03245 - - lja:Lj3g3v3213190.1 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04441 11 56713779 56715656 Trre7g03245 7 30788902 30790902 PCT