Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03231 ATGGGGGAAGAAGTTCGAACAGATGAAGAACGCGTAACGGAGTGGGAAAAAGGTCTACCCAATCTTCACGATCTAACTCCACTTTCCATGGCGTTGATTCCACCGGAGTTAGCTTCCGCTTTCAGCATCTCTCCGGAGCCTCATCGTACACTCATCGACGTTAACCGTGCCTCCCGCAACACTCTCTCAATTCTCCGAAACAGCGGAGGAACAAACCACCACCACCACCAACAACAACAACAACAACACTTCTCGCCAGAACCAGAAGAAGACGAAGAAATCGAAGACGAAACCGATCGAGATGGTTCGGGATCTGATTCACGAAAACATCGGAAAATTGATTCTGTTAATGAGGAAGCAGATTCGGCTGTTAGAACTACTGAAACGACGTTAAAACGGCCGCGTTTGGTGTGGACTCCACAGTTACATAAAAGATTCGTTGATGTAGTTGCTCATCTCGGAATCAAAAACGCTGTTCCGAAAACGATTATGCAGTTGATGAATGTTGAAGGATTAACACGTGAGAATGTTGCTTCTCATTTGCAGAAATATCGTCTTTATTTGAAGAGGATGCAAGGTCTTTCAAACGACGCACCTTCTTCTTCTGATCATCTTTTTGCATCAACACCTGTTCCTCAGAGTTTGCAATTGCAGCAACATGAATCTGTTTCTGCTAATAATCATTCTCATTCGCAATCGAATGGACATGGAAATGGGAATAATTCGCATTCGCATCATCATTCTGTTACTATTCCTATGCCTTATCCACCACCTCCGACGATGATGTCAATGCCGCCGATGCTTGGTATGGGACATCATCATCCACATGGTCATATGGGGATGAGTTTGCCTCCTCCTTCTGGTTCTAACTCGTATCGGTCTCATCCGTTTAATATGATGCATCATAGGGATTGGCCTCCGAATCCTCACTCTCATCCTCATATGTCTGCTAATGATAGTAATAAATAA 969 0.4427 MGEEVRTDEERVTEWEKGLPNLHDLTPLSMALIPPELASAFSISPEPHRTLIDVNRASRNTLSILRNSGGTNHHHHQQQQQQHFSPEPEEDEEIEDETDRDGSGSDSRKHRKIDSVNEEADSAVRTTETTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNDAPSSSDHLFASTPVPQSLQLQQHESVSANNHSHSQSNGHGNGNNSHSHHHSVTIPMPYPPPPTMMSMPPMLGMGHHHPHGHMGMSLPPPSGSNSYRSHPFNMMHHRDWPPNPHSHPHMSANDSNK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03231 322 Gene3D - 129 192 - -
Trre7g03231 322 MobiDBLite consensus disorder prediction 101 127 - -
Trre7g03231 322 SUPERFAMILY Homeodomain-like 130 190 IPR009057 -
Trre7g03231 322 MobiDBLite consensus disorder prediction 217 248 - -
Trre7g03231 322 MobiDBLite consensus disorder prediction 64 84 - -
Trre7g03231 322 MobiDBLite consensus disorder prediction 217 322 - -
Trre7g03231 322 MobiDBLite consensus disorder prediction 1 21 - -
Trre7g03231 322 NCBIfam myb-like DNA-binding domain, SHAQKYF class 134 186 IPR006447 GO:0003677
Trre7g03231 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 138 189 IPR017930 -
Trre7g03231 322 MobiDBLite consensus disorder prediction 1 18 - -
Trre7g03231 322 MobiDBLite consensus disorder prediction 64 127 - -
Trre7g03231 322 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 9 281 IPR044841 GO:0003700|GO:0006355
Trre7g03231 322 Pfam Myb-like DNA-binding domain 137 185 IPR001005 -
Trre7g03231 322 FunFam Two-component response regulator 129 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03231 Trre-Chr7 30496822 30497790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03231 1 216 G2-like Transcription Factor Family AT3G46640 57.851 1.23e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre7g03231 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03231 - - tpra:123918598 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03231 7 30496822 30497790 Trre7g03231 7 30496822 30497790 ECH