Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03196 ATGGAAAATAGAAGAATTCAACAATCAAGAGAACATGAAAAGGAAATAAGGGCACAATATCAAAGAATGAGCGGTGAACAAGGACAACAAGAGTTATTGACAAGGCGAGAGAATTATAATCGAGCAAGGAAAAAGGGGAACAAGTGGAAACATCTACTGATAGTGTTGTTTCAAGAGTGTCATTCCAAAATTCAACAAAGGATCAATCATCCACTTCAACCCTTCTCAATTCCCAATTCAATCCACTTCTTTCTCTTCTCTGGGTCTTTCTACACGTTTTCTTCTTCTCTTCAACTGACTTGGCTCAGTTTAATGAAGGAAATGGAACACGAAAAAGCCGCAATCTTGGAAGCAATATCGGTAGAAGAAATTGAGATACCAATTGTCTCCGAAAGACTTGATCTAATTCCAATGACAACAATGTCGTCTCACAACAATTCTGTTTGTCGGTTTTCCAGAAAGGATAAAAATGTTTGTGCATCGAATGAATCGGCCAAGAAACTTTCTTTGCTTATAGTTTTCTATGCTATTGTTATGGTTGTTGAACTTATTGGAGGTTTGAAAGCTCACAGTTTATCTGTTATCAGTGATGCTGCACATTTGCTTTCTGATATAGCCGGATTCGCAATCTCTCTCTTTGCAGTGTGGGCTTCAAGTTGGGAAGCAACACCTCATCAATCCTTTGGATACAATCGTCTCGAGGTTTTGGGCGCTCTTTTATCTGTTCAGCTAATTTGGTTCATATCTGGTTTTTTAATATATGAAGCAGTTGGTAGACTAGTTTATAGAAATGCTAATGTGAATGGAAAGCTCATGTTTGCAATTGCAACATTCGGGTTTGTTCTTAATTGTATCATGGTTTTATGGCTTGGTCATGATCATAGTCATCATCATGGATTTGGAGACTCAAATCATGATCATGATCATGATCATGGTCATAGCCATCACCATGGTCATGGTCAAAGTCATCATCAATGCGGTGGAGACTCGGATCATGACCATGGAACGGAGGAACTACCTAAAATAATTGATGAGGAGAATCTTACAATGCTTTCAAATGGTAAGCGGAATATGAATGTTTTGAACATTAATATTCAAGGAGCCTATTTGCATGTCATGACTGATATGATTCAATCTATCGGAGTGATGATTGCTGGAGGCGTAATATGGGCGAAACCAGAATGGTTTATGGTTGATCTTTTATGTACTCTCATATTCTCTGTACTATCTTTAAGTACTACTCTGCCAATGCTTAGGAATATTTTTGGCATTCTGATGGAGAGAACACCTAGTGAGATTAATATCATTCAGCTGGAAAATGGTCTTAGAAGTATCAAGGGAGTGCAAGAGGTTCATGACTTGCACGTTTGGGCTATAACAGTTGGAAAATTGTTTTTATCATGTCATGTAGTGGCTGAGCCTGGCATCAGTTCCATTCATTTACTTGATAAGATTAAACATTATTGTGAAGATTCTTATCAAATACAACATGTAACCATACAAATTGAGTAA 1512 0.375 MENRRIQQSREHEKEIRAQYQRMSGEQGQQELLTRRENYNRARKKGNKWKHLLIVLFQECHSKIQQRINHPLQPFSIPNSIHFFLFSGSFYTFSSSLQLTWLSLMKEMEHEKAAILEAISVEEIEIPIVSERLDLIPMTTMSSHNNSVCRFSRKDKNVCASNESAKKLSLLIVFYAIVMVVELIGGLKAHSLSVISDAAHLLSDIAGFAISLFAVWASSWEATPHQSFGYNRLEVLGALLSVQLIWFISGFLIYEAVGRLVYRNANVNGKLMFAIATFGFVLNCIMVLWLGHDHSHHHGFGDSNHDHDHDHGHSHHHGHGQSHHQCGGDSDHDHGTEELPKIIDEENLTMLSNGKRNMNVLNINIQGAYLHVMTDMIQSIGVMIAGGVIWAKPEWFMVDLLCTLIFSVLSLSTTLPMLRNIFGILMERTPSEINIIQLENGLRSIKGVQEVHDLHVWAITVGKLFLSCHVVAEPGISSIHLLDKIKHYCEDSYQIQHVTIQIE 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03196 503 MobiDBLite consensus disorder prediction 301 315 - -
Trre7g03196 503 MobiDBLite consensus disorder prediction 301 337 - -
Trre7g03196 503 Pfam Cation efflux family 170 426 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Trre7g03196 503 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 431 503 IPR036837 -
Trre7g03196 503 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 147 503 - -
Trre7g03196 503 SUPERFAMILY Cation efflux protein transmembrane domain-like 166 427 IPR027469 -
Trre7g03196 503 NCBIfam cation diffusion facilitator family transporter 166 503 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Trre7g03196 503 Gene3D Cation efflux protein transmembrane domain 164 425 IPR027469 -
Trre7g03196 503 MobiDBLite consensus disorder prediction 322 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03196 Trre-Chr7 30105982 30109262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03196 149 503 Inorganic Solute Cotransporters AT2G46800 45.812 9.45e-99 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03196 K14689 - gmx:100789520 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03196 7 30105982 30109262 Trre7g03196 7 30105982 30109262 ECH