Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03173 ATGGATGATGGACACATGCACCACGGCGGCATGGATGGTATGACGATGACACCAGTACCATCACCACCATCATCATCATCCAATGGTACTACCATGATGATGGGTCATAAGATGCACGGTATGATACACATGACATTCTTTTGGGGTAAAGATGCTTTGATTCTCTTCAATAATTGGCCTAATGGTGATACTGGTATGTATGTATTGGCTTTGATAATTGTTTTCGTCATGTCCGTACTCATCGAGTTACTCTCACGGACCCGGTTCATTAAACCCGGTTCAAACTCTGTTGCTTCCGGTTTGGTTCAGACACTTTTGCATGTTCTTAGAGTTGGGTTAGCTTATTTGGTTATGTTGGCACTTATGTCTTTTAATGGTGGTGTTTTCTTGGTTGCTGTTCTTGGTCATGCTCTTGGATTCTTCTTATGTAGCAGTGCTTTCAGAAAACCGCATCATAATGAACCTTATGATCTTCCTCCCTTATCTTGTTAA 492 0.4167 MDDGHMHHGGMDGMTMTPVPSPPSSSSNGTTMMMGHKMHGMIHMTFFWGKDALILFNNWPNGDTGMYVLALIIVFVMSVLIELLSRTRFIKPGSNSVASGLVQTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHALGFFLCSSAFRKPHHNEPYDLPPLSC 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03173 163 MobiDBLite consensus disorder prediction 1 30 - -
Trre7g03173 163 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 33 151 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre7g03173 163 Pfam Ctr copper transporter family 44 86 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre7g03173 163 Pfam Ctr copper transporter family 98 143 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03173 Trre-Chr7 29805240 29805731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03173 36 160 Inorganic Solute Cotransporters AT5G59040 46.825 3.65e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03173 K14686 - gmx:100306175 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03173 7 29805240 29805731 Trre7g03173 7 29805240 29805731 ECH