Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03157 ATGGCTTCCATTCCTCTCACCACCACCGCCACCCTCCTCCCCTCTCTCCGCCACCGTTCCTCCCCCTCACTCCGCCACTTCCATTCCAACACCACTCTCAAACCCCTTAAATCACTTCGCCACTCTTCCATTTCCACCTTCTCCCCTCTCCCACTCTCAAACCTCATTTCTTCCAATTCAAAACGCAACACTCTCGTTGTTAAAGCTTCATCAGCTTCCATCACACCAGCTCCAGCTCCAGCACCGGCTCAGCCATGGCAAGGAGCCGCGATAAAACCACTCTTAGCATCAATAGCAACCGGAGTTATTCTCTGGTTCGTTCCCACTCCCGAAGGTGTATCAAGACAAGCGTGGCAGTTACTCGCGATTTTCTTAGGAACAATCGTCGGAATCATCACACAACCATTACCACTTGGTGCTGTCGCGATTTTAGGCTTAGGAGTTTCTGTTCTCACGAAAACCCTATCCTTTGTAGCTGCATTCTCTGGATTCGGTGATCCAATTCCATGGTTAATTTGTCTCGCATTTTTCTTCGCTAAAGGTTTCATCAAAACTGGATTAGGTAATCGTGTTGCGTATCAATTCGTTTCGCTTTTCGGTAGTTCTTCGTTAGGGTTAGGTTATAGTTTGGTTTTTAGTGAAGCTTTATTAGCACCGGCAATTCCTTCGGTTTCGGCTAGAGCTGGTGGAATTTTTCTTCCATTGGTTAAATCTTTGTGTGTTGCTTGTGGAAGTAATGTTGGTGATGGAACTGAGAATAAGCTTGGATCTTGGTTGATGCTTACTTGTTTTCAGACTTCTTGTATTTCGTCTGCCATGTTTTTGACTGCAATGGCTGCGAATCCGCTTTGTGCTACGCTTACTTTGAATTCAATTAACCAGACAATCGGTTGGTTGGATTGGGCTAAAGCTGCTATTGTGCCTGGTTTGGTGTCGTTGATATTGGTGCCGTTGATTTTGTATGTTATATACCCTCCTACCTTGAAATCTAGTCCTGATGCACCTAAGCTTGCTAGGGAAAAGTTGGAGAAAATGGGGCCTATGACAAGCAATGAGAAAATCATGACTGCTACTCTGTTTCTTACGGTGGGACTTTGGGTTTTTGGAGGGGTTCTTAAAGTAGATGCTGTAACTTCTGCCATTCTTGGATTAGCCATACTCCTCATCACAGGGGTTGTAACATGGAAAGAGTGCTTAGCTGAGGGTGTTGCATGGGATACACTCACATGGTTTGCTGCCCTCATTGCAATGGCCGGGTATTTGAACAAATATGGTCTCATCGCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTCTCATGGCAACTATCTTTTGGTATTCTGGTCCTCCTCTACTTCTACTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTGCTACTGCTCTGGGAACTCCACCATTCTTCGGAGCCATGGTGCTGTCCTTCCTCTCGAACCTTATGGGAGGCCTTACTCATTATGGGATTGGGTCAGCTCCAGTGTTTTTCGGTGCCAACTATGTCCCACTTGCCAAATGGTGGGGTTATGGCTTTGTTATTAGTATTGTGAACATTATAATCTGGCTTGGACTCGGTTCTATTTGGTGGAAATTCATTGGCTTGTGGTAA 1671 0.4536 MASIPLTTTATLLPSLRHRSSPSLRHFHSNTTLKPLKSLRHSSISTFSPLPLSNLISSNSKRNTLVVKASSASITPAPAPAPAQPWQGAAIKPLLASIATGVILWFVPTPEGVSRQAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLSFVAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENKLGSWLMLTCFQTSCISSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLVSLILVPLILYVIYPPTLKSSPDAPKLAREKLEKMGPMTSNEKIMTATLFLTVGLWVFGGVLKVDAVTSAILGLAILLITGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLIAWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFVISIVNIIIWLGLGSIWWKFIGLW 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03157 556 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 62 556 IPR030676 -
Trre7g03157 556 Pfam Sodium:sulfate symporter transmembrane region 93 556 IPR001898 GO:0016020|GO:0022857|GO:0055085
Trre7g03157 556 CDD ArsB_NhaD_permease 128 550 - -
Trre7g03157 556 NCBIfam DASS family sodium-coupled anion symporter 108 550 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03157 Trre-Chr7 29662569 29665631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03157 1 555 Antiporters AT5G12860 79.004 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03157 - - gmx:100796365 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03157 7 29662569 29665631 Trre7g03157 7 29662569 29665631 ECH